Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0801 ATGTCCGCAGAAAAGGAGAGAGAAACCCAGGTTTACTTGGCCAAGCTTTCTGAACAGGCCGAACGATATGAAGAAATGGTTGAATGTATGAAGAAAGTAGCTAAGCTTGATCTTGAGCTGACTGTGGAGGAGAGGAACCTTCTCTCAGTGGGATATAAGAATGTCATTGGTGCCAGGAGAGCTTCTTGGCGAATTATGTCTTCAATTGAACAGAAGGAAGAGTCCAAGGGAAATGAGCACAATGTTAAACTGATCAAAAGTTACTGCCAAAAGGTTGAGGAGGAACTCGCCAAAATTTGCAGTGACATTCTGACAATTATAGACGAGCATCTGATTCCATCTTCCACCTCAGCAGAGGCAAATGTATTCTACTATAAGATGAAGGGTGATTATTTCCGGTATCTTGCTGAGTTCAAGACTGACCAGGAAAGGAAAGAGGCAGCTGAGCAGTCACTGAAAGGATATGAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACACCCAATCCGTCTTGGACTTGCACTCAACTTCTCTGTCTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCCGAGTTGGATACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACCTCCGATTTGCCTGAGGATGGAGGTGAGGACAACATAAAAGCTGATGAAGCCAAACCTGCTGAGCCTGAGGTATCATTGACAAGGTTCCACTTAATATTTGACATTGGCATGGAAGTAGTCATATATCCAAGGTACTATGGAAAGAGGAAATTTTTCAGCTTTTCTGGCAATGGATTTGGACCGGACAATGTGTGGACCAAGGCCTCTTCATAG 918 0.439 MSAEKERETQVYLAKLSEQAERYEEMVECMKKVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELAKICSDILTIIDEHLIPSSTSAEANVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDNIKADEAKPAEPEVSLTRFHLIFDIGMEVVIYPRYYGKRKFFSFSGNGFGPDNVWTKASS 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0801 305 Coils Coil 13 33 - -
Lal6g0801 305 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
Lal6g0801 305 PANTHER 14-3-3 PROTEIN 3 256 IPR000308 -
Lal6g0801 305 SUPERFAMILY 14-3-3 protein 6 237 IPR036815 -
Lal6g0801 305 Pfam 14-3-3 protein 13 235 IPR023410 -
Lal6g0801 305 Coils Coil 195 215 - -
Lal6g0801 305 SMART 1433_4 7 249 IPR023410 -
Lal6g0801 305 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Lal6g0801 305 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Lal6g0801 305 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Lal6g0801 305 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Lal6g0801 305 PRINTS 14-3-3 protein zeta signature 181 207 IPR000308 -
Lal6g0801 305 PRINTS 14-3-3 protein zeta signature 208 237 IPR000308 -
Lal6g0801 305 PANTHER BNAC03G57490D PROTEIN 3 256 - -
Lal6g0801 305 ProSitePatterns 14-3-3 proteins signature 2. 217 236 IPR023409 -
Lal6g0801 305 Gene3D - 1 249 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0801 Lal-Chr6 5375005 5381903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0801 3 256 14-3-3 family AT1G26480 85.714 1.67e-163 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0801 - K06630 gmx:100529129 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0801 6 5375005 5381903 Lal6g0801 6 5375005 5381903 ECH
Lal22g0702 22 5058965 5066213 Lal6g0801 6 5375005 5381903 LSH
Lal15g0774 15 5533547 5537776 Lal6g0801 6 5375005 5381903 PCT
Lal6g0801 6 5375005 5381903 Lal15g0774 15 5533547 5537776 PCT