Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0790 ATGGAAGAAACACAAGGCCACTATTATCCGTCAAGTATGCCTGAATCTACCTTATCTAGTGACAATGGAGGGAGGTCTAATTTCGTTGGGCAAGTGAATCGTGGGCTTGGTGTACCAGGTCTGAAGAAGAGAGGTCATGGAACTCGCTCTTGGATAAAAATTGATCAGGATGGGAATTCTCAGACTCTGACGCTTGACAAGGGTACCATCATGAGAAATTGCGCTTTGCCCTCTAGAGATCTCCGGCTATTGGATCCGATGTTCATTTATCCTTCTACCATATTAGGACGGGAGAAGGCTATTGTAGTCAACCTTGAGCAAATCCGGTGTATAATCACTGCTGATGAGGCCATCCTTATGAATTCTCTGGATGGTAGTGTTGGTCAGTACAGGGCTGAATTATGCAATCGGCTTCAGAAAGAAAAAACTGATGATCTTCCTTTTGAATTTAGAGCACTGGAGTTGGCTCTGGAATTGACATGCACATCTTTAGATGCTCAGGTAAAAGAGCTGGAAATGGAAATATATCCTGTGCTAGATGAACTAGCCTTATCTATCAGTACTATCAATCTCGAACGTGTTCGAAGATTTAAAGGTCACCTCCTTGCTTTGACTCAGCGAGTTCAGAAGGTTGATCATCTTAGAATTCTCACCCTTGATTATTATTCTTATGATTCTGTCTTTCTATCACCTGCCAGTGGTAACTTATTATTCAATTCCCAGGTTCGTGATGAAATCGAGCATCTCATGGATGATGATGGTGACATGGCTGAGATGTGCCTGACTGAGAAAAAGATGAGATCGGATGGTTACCCTTTAAATGATTATCTTCAAACTATTTCATCAGGTAGTGGTAGAGTGATTTCAAGATCAGCTCCTGCTTCACCCGAGCGGTCAACTAGTGGGCTCCAGATGTTGCAAAGGGCTTTCAGCAGCATTGGGAATTCAAGTAAGCATGGAAGTTCAGTGGGTTCATCTGATAATGGAGAAAGGATTGAGCCACTAGAAATGTTGCTTGAAGCATACTTTATCGTCATTGATAATACTCTCAACACATTATTCTCGTTGAAAGAATACATTGATGACACGGAGGATTTTATCAACATAAAATTGGGTAATATTCAAAACCGCCTAATACAGTTTGAGGTGCTTCTTACAGCGGCTACATTGGTAGCTGCAGTTTTTACTGTTGTGGCAGGAGTATTTGGAATGAACTTTAAAGCCGCAGTTTTTGATTATCCATTCGGATTCCATTGGGTTCTGATAATTACTGGAATTGCTTGTGCATCATTGTATATCGCCTTTCTATACTATTTTAGGTACAAGAATGTGCTTCCATCATAA 1344 0.4107 MEETQGHYYPSSMPESTLSSDNGGRSNFVGQVNRGLGVPGLKKRGHGTRSWIKIDQDGNSQTLTLDKGTIMRNCALPSRDLRLLDPMFIYPSTILGREKAIVVNLEQIRCIITADEAILMNSLDGSVGQYRAELCNRLQKEKTDDLPFEFRALELALELTCTSLDAQVKELEMEIYPVLDELALSISTINLERVRRFKGHLLALTQRVQKVDHLRILTLDYYSYDSVFLSPASGNLLFNSQVRDEIEHLMDDDGDMAEMCLTEKKMRSDGYPLNDYLQTISSGSGRVISRSAPASPERSTSGLQMLQRAFSSIGNSSKHGSSVGSSDNGERIEPLEMLLEAYFIVIDNTLNTLFSLKEYIDDTEDFINIKLGNIQNRLIQFEVLLTAATLVAAVFTVVAGVFGMNFKAAVFDYPFGFHWVLIITGIACASLYIAFLYYFRYKNVLPS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0790 447 CDD Mrs2_Mfm1p-like 51 444 IPR039204 -
Lal6g0790 447 Gene3D Magnesium transport protein CorA, transmembrane region 385 443 - -
Lal6g0790 447 MobiDBLite consensus disorder prediction 1 25 - -
Lal6g0790 447 Gene3D - 40 122 - -
Lal6g0790 447 Gene3D Magnesium transport protein CorA, transmembrane region 126 219 - -
Lal6g0790 447 Gene3D Magnesium transport protein CorA, transmembrane region 239 378 - -
Lal6g0790 447 MobiDBLite consensus disorder prediction 9 25 - -
Lal6g0790 447 Pfam CorA-like Mg2+ transporter protein 346 435 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lal6g0790 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 241 446 IPR039204 -
Lal6g0790 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 2 212 IPR039204 -
Lal6g0790 447 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 384 436 IPR045863 -
Lal6g0790 447 PANTHER MAGNESIUM TRANSPORTER MRS2-5 241 446 - -
Lal6g0790 447 PANTHER MAGNESIUM TRANSPORTER MRS2-5 2 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0790 Lal-Chr6 5319339 5325376 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0790 1 446 MRS2 Gene Family AT2G03620 58.499 8.44e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0790 K16075 - gmx:100803935 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0790 6 5319339 5325376 Lal6g0790 6 5319339 5325376 ECH