Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0787 ATGGAGAAGGGTAAGTACCCTAGAGATCTGCTTCAAATATTTAACATGTCAAGTACTACTAATGGTGGTGTTGGTGGTAGTGATGATTATAATCATAATCATAATCATCAACAACATCAGCATCAGAATTTTTATCACAAACAACTGCTAGAAGAAGAGAATGGTGAAGAGGATAAGGAAGTGGTTGAGTTGAATCTTGGTCTTTCATTAGGTGGAAAATTTGGTGTTGATAAGTATGCTGCATATAAGAGAAACAAACTCATGAGGTCCTCTTCTGTTGTGGGGACAATGCCCCTATTTCATGAGGGCGAGGGCGTGGTGTCGCGATCACTGATGATGGCGGCACCACACCCTATCCTCATGAGGACATCCTCTCTGCCGGTAGAGACAGAAGAGGAGTGTAGGAAGAGGAAGGAGCTGCAGATGCTGCGTCGGATGGAGGCCAAGAGGAGGAGGTCGGAGAAGAGAGGTTCCAAGCCGGAGAGAGAAGGTTCTGCAGGTGGTGGTGGTTTGGAGGAAGTAGAGGGTGCAAGTGCAGCAGCAGCAGCAACAGTGGGGTTGAATAGGTTAGTTGGTTCTGGAAATGTGGGGTCACCACCTTGGGGAATGGGGGAAAAACAAGTTGTTCTTGGTGATGTGTTGGGAAAAGGGAAAGTTGGTGGTGCTGGTTTTCAAGGATTGTTTACACAGCCATCTTCTCAGGGTTCAGTTGATTCCCAAGGTGGAAGCTCATCTTCAGTGTCTGAAATGGAGAGCAGGCCTATTCTAGGACCAAGCAGTTGTGGAGAAGCAAGAAGCCCAGCTAGTAATCAGTCGGTACAGGAACGGCTAAGCAGTCGTGATGCTATTGGTTCATTAGGGACAAATACAAATGAAAATATGACCAGAACTTCCAGAGTTGCTGAGATGGAGAATCCATCTAAAAGACCACCCCCTCTTGCCCAAAATATAGGGAGAGAAATTGGGACAAACTCAATGGAAGACATGCCTTGTGTATTTACAAAAGGGAATGGACCTAATGGAAGAAGAATTGAGGGAATATTATACAAATATGGTAAAGGGGAAGAAGTGAGGATAATGTGTGTATGTCATGGAAAATTTCTTTCTCCAGCCGAGTTTGTTAAGCATGCAGGTGGTGGTGATGTAGCTAACCCACTTAGGCACATTGTTATTAACCCTTCAGCCGCATCCTTTGTTTAG 1200 0.4517 MEKGKYPRDLLQIFNMSSTTNGGVGGSDDYNHNHNHQQHQHQNFYHKQLLEEENGEEDKEVVELNLGLSLGGKFGVDKYAAYKRNKLMRSSSVVGTMPLFHEGEGVVSRSLMMAAPHPILMRTSSLPVETEEECRKRKELQMLRRMEAKRRRSEKRGSKPEREGSAGGGGLEEVEGASAAAAATVGLNRLVGSGNVGSPPWGMGEKQVVLGDVLGKGKVGGAGFQGLFTQPSSQGSVDSQGGSSSSVSEMESRPILGPSSCGEARSPASNQSVQERLSSRDAIGSLGTNTNENMTRTSRVAEMENPSKRPPPLAQNIGREIGTNSMEDMPCVFTKGNGPNGRRIEGILYKYGKGEEVRIMCVCHGKFLSPAEFVKHAGGGDVANPLRHIVINPSAASFV 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0787 399 MobiDBLite consensus disorder prediction 130 168 - -
Lal6g0787 399 Pfam Ethylene-responsive binding factor-associated repression 57 95 IPR012463 -
Lal6g0787 399 Pfam Putative nuclear localisation signal 120 252 IPR032310 -
Lal6g0787 399 Pfam Tify domain binding domain 357 391 IPR032308 -
Lal6g0787 399 PANTHER NINJA-FAMILY PROTEIN AFP1 5 396 - -
Lal6g0787 399 MobiDBLite consensus disorder prediction 263 301 - -
Lal6g0787 399 Coils Coil 136 156 - -
Lal6g0787 399 PANTHER AFP HOMOLOG 2 5 396 IPR031307 GO:0007165
Lal6g0787 399 MobiDBLite consensus disorder prediction 226 253 - -
Lal6g0787 399 MobiDBLite consensus disorder prediction 225 314 - -
Lal6g0787 399 MobiDBLite consensus disorder prediction 130 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0787 Lal-Chr6 5305470 5309113 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0787 - - lang:109340383 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0787 6 5305470 5309113 Lal6g0787 6 5305470 5309113 ECH
Lal22g0697 22 5027863 5032814 Lal6g0787 6 5305470 5309113 LSH