Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0777 ATGCTCATTTCGAGGCAAACCTTCTACACCTTTTCTTCTTCTCCTTCTTCATTTCTTTGTATCATTTTCCTATACACAACTCTTCTCTATGGCCTTGCCTTTTCTACAAACCATGAATCCTCTATTCTCTTCACATGGCTTCATAGTTCTGCATCACCACCTCCTCCTTTTTTCTCTAACTGGAACATACATGACATAAATCCATGCAAATGGACCTTCATAACATGCTCCTCACTAGGCTTTGTCACTGAGATCAATATAGAATCAATCCCTCTTCAGCTTCCAATACCTTCCAATCTCTCTTCATTCCCATTTCTTAACAAACTTGTCATTTCTGATGCCAACCTCACTGGAACAATCCCTTTTGACATTGGTGATTGTTCTTCACTCACTGATTTAGACCTTAGCTCCAACAACCTTGTTGGGTCTATCCCTTCAAGTATTGGCAAGCTCAACAACCTTGTGAACTTGTCTTTGAACTCAAACCAACTCACAGGAAAAATACCAGTTGAGATAAGCAACTGCATTGGGCTAAAAAATCTTCTCCTATTTGATAATCAGCTAGGTGGAAGTATTCCACCTGAGTTAGGAAAGTTGTCACAACTTGAAGTCCTTAGAGCTGGTGGAAACAAAGATATAGCTGGGAAGATTCCTGAAGAGCTTGGAGAATGTAGAAATTTGACTGTGTTGGGGCTGGCTGATACTAGAATTTCTGGTTCTTTGCCTGCTTCATTGGGTAAACTTAAAAAGATTAAGACTTTGTCTATCTACACTACTATGCTATCTGGTGAAATTCCACCAGATTTAGGTAACTGTTCTGAACTTGTTGATTTGTTTCTCTATGAGAATAGTCTATCAGGATCTCTTCCATCTGAGCTTGGTAAGCTACAAAAGCTGGAACAGCTCTTTTTATGGAAGAATAGTATTGTTGGGGCTATACCTGAAGAGATTGGTAACTGTACAAGCTTGAGAAAATTTGATCTCTCTTTGAATTCTCTATCTGGAACTATACCTTTGTCTTTGGGGGGTCTTTTAGAACTTGAGGAATTTATGATTAGTGATAATAATGTGTCTGGATCAATACCTTCAAGTTTTTCAAATGCTAAGAATCTTCAACAGTTGCAAGTTGACACAAATCAGATCTCAGGCTTGATTCCACCAGAGCTTGGGCAGTTGTCAAATCTCTTAGTGTTCTTTGCTTGGCAGAACCAGCTTGAAGGAAGCATTCCTTCCACATTGGGAAACTGTAGTAAGCTACAAGCACTAGACTTGTCTCACAATGCACTAACTGGTAGCATTCCTGCTAGTCTTTTTCTGCTCCAAAACCTCACAAAAATGCTTCTGATTTCCAATGACATATCAGATTCTATACCATCAGAAATAGGTAGTTGTGCCTCTCTTATAAGGTTGAGGCTTGGAAACAACAGGATCACTGGCAGCATTCCTAAGACGATATGCAACCTCAAGAGCTTGAACTTTTTAGATCTCTCAGGTAACCGCCTCTCCGGACTGGTGCCTGATGAGATTGGAAGCTGCACAGAACTTCAAATGATAGACTTCAGCAGTAACAACTTAGAAGGACCACTACCTAATTCTTTGTCATCACTATCCTCACTTCAGGTACTGGATGCATCTTCAAACAAGTTCTCTGGTCCCATAGCATCAAGTTTCGGACATCTTGTTTTTCTAAGTAAATTAATCCTAGGCAATAACTTGTTTTCTGGATCAATACCAACATCACTAGGCCTATGTTCAAATCTCCAACTTCTTGATCTTAGTAGCAATCAGTTCACTGGAAACATACCAGCTGAGCTAGGCCTTATTGAGAGTCTAGAAATTGCTCTTAATCTTAGTAGCAATTCACTAAGTGGCCCAATCCCACCTCAGATATCTGCTCTTAACAAGCTTTCTATACTTGACCTCTCACATAACCAGTTGGAGGGAGATTTGCAATCTCTTGGACTGCTATACAATCTTGTCTCCCTTAATGTTTCATACAATAAGTTCACTGGATTTCTTCCAGATAACAAGCTTTTCAGGCAGCTATCATCAAAAGACCTCACCGGAAATAAAGGCCTTTGCAATTCAGGTCAGGACTCATGCTTTGTTAATGGTTCTGGCAAGACAAGTTTGTCATTGAATGGAAATGATGCAAGGAAGTCGCGAAGGCTTAAGCTAGCAATTGGATTGCTGATAGCCTTAACAGTAATAATGATAATTATGGGGATAACAGCTGTGATAAAAGCAAGAAAATGCATTAGAGATGAGGATTCAGAATTAGGAGGAGACTCATGGGCATGGCAATTCATACCTTTCCAGAAGCTAAATTTTTCAGTGGAACAAATACTGAGATGCTTGGTTGATAGAAATGTGATTGGGAAGGGATGCTCAGGTGTTGTTTATCGCGCTGAAATGGATAATGGTGAAGTCATTGCTGTGAAGAAATTATGGCCAATAACAAACGATGCAGGGGAGGCATTTAGGGATGAAAAAAGTGGAGTTCGCGACTCATTCTCTACTGAGGTGAAGACGCTTGGTTCAATCCGTCATAAGAACATTGTCAGATTCTTAGGCTGTTGTTGGAACAAGAAAAACAGATTGCTCATATTTGATTATATGGCTAATGGAAGTTTAAGCAGTATACTCCATGAAAGGACTGGAAATTCTCTAGAATGGGAACTTAGGTACCGAATCTTGTTAGGCGCCGCAGAAGGCCTCGCATATCTGCATCATGATTGTGTCCCGCCTATAGTCCACAGAGATATTAAAGCCAATAACATCCTCATTGGCCTTGAATTTGAGCCTTATATTGCTGACTTTGGCTTGGCTAAGCTTGTTGACAATGGCGATTTCGGTCGGTCTTCTAATACAGTAGCTGGTTCCTATGGATATATTGCCCCAGAATATGGTTATATGACGAAGATCACAGAAAAGAGTGATGTTTATAGCTATGGTATAGTTGTGTTAGAAGTCTTGACAGGTAAGCAACCAATTGATCCAACAATACCAGATGGTGTACATGTTGTTGATTGGGTGAGAAAGAAAAGAGGGCTTGAAGTACTTGATCCTAGTTTACTCTCTAGACCAGAATCAGAAATAGAAGAAATGATGCAAGCATTAGGAATAGCTTTATTATGTGTAAATTCATCACCAGATGAAAGACCAACAATGAGAGATATTGCAGCAATGCTCAAAGAAATAAGACATGAGAGGGAAGAATATGCAAAATTTGATGCACTTCTAAAAGGGTCTTCTGCAAATGACAATAAAATCACTTCTGGAATTTTGGCAACAACTTCATCAGTGCCAACCATGCAAAACTTGAATGTAAAAAATAACAACACAAGCTTCTCTGTGTCTTCACTACTTCATTCATCATCTTCTACAGCATAA 3393 0.3952 MLISRQTFYTFSSSPSSFLCIIFLYTTLLYGLAFSTNHESSILFTWLHSSASPPPPFFSNWNIHDINPCKWTFITCSSLGFVTEINIESIPLQLPIPSNLSSFPFLNKLVISDANLTGTIPFDIGDCSSLTDLDLSSNNLVGSIPSSIGKLNNLVNLSLNSNQLTGKIPVEISNCIGLKNLLLFDNQLGGSIPPELGKLSQLEVLRAGGNKDIAGKIPEELGECRNLTVLGLADTRISGSLPASLGKLKKIKTLSIYTTMLSGEIPPDLGNCSELVDLFLYENSLSGSLPSELGKLQKLEQLFLWKNSIVGAIPEEIGNCTSLRKFDLSLNSLSGTIPLSLGGLLELEEFMISDNNVSGSIPSSFSNAKNLQQLQVDTNQISGLIPPELGQLSNLLVFFAWQNQLEGSIPSTLGNCSKLQALDLSHNALTGSIPASLFLLQNLTKMLLISNDISDSIPSEIGSCASLIRLRLGNNRITGSIPKTICNLKSLNFLDLSGNRLSGLVPDEIGSCTELQMIDFSSNNLEGPLPNSLSSLSSLQVLDASSNKFSGPIASSFGHLVFLSKLILGNNLFSGSIPTSLGLCSNLQLLDLSSNQFTGNIPAELGLIESLEIALNLSSNSLSGPIPPQISALNKLSILDLSHNQLEGDLQSLGLLYNLVSLNVSYNKFTGFLPDNKLFRQLSSKDLTGNKGLCNSGQDSCFVNGSGKTSLSLNGNDARKSRRLKLAIGLLIALTVIMIIMGITAVIKARKCIRDEDSELGGDSWAWQFIPFQKLNFSVEQILRCLVDRNVIGKGCSGVVYRAEMDNGEVIAVKKLWPITNDAGEAFRDEKSGVRDSFSTEVKTLGSIRHKNIVRFLGCCWNKKNRLLIFDYMANGSLSSILHERTGNSLEWELRYRILLGAAEGLAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDNGDFGRSSNTVAGSYGYIAPEYGYMTKITEKSDVYSYGIVVLEVLTGKQPIDPTIPDGVHVVDWVRKKRGLEVLDPSLLSRPESEIEEMMQALGIALLCVNSSPDERPTMRDIAAMLKEIRHEREEYAKFDALLKGSSANDNKITSGILATTSSVPTMQNLNVKNNNTSFSVSSLLHSSSSTA 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0777 1130 Gene3D Ribonuclease Inhibitor 39 149 IPR032675 -
Lal6g0777 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 917 929 IPR008271 GO:0004672|GO:0006468
Lal6g0777 1130 Pfam Protein kinase domain 789 1061 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0777 1130 Pfam Leucine rich repeat 442 501 IPR001611 GO:0005515
Lal6g0777 1130 SUPERFAMILY L domain-like 385 717 - -
Lal6g0777 1130 Gene3D Ribonuclease Inhibitor 150 230 IPR032675 -
Lal6g0777 1130 PRINTS Leucine-rich repeat signature 491 504 - -
Lal6g0777 1130 PRINTS Leucine-rich repeat signature 633 646 - -
Lal6g0777 1130 SUPERFAMILY L domain-like 49 403 - -
Lal6g0777 1130 ProSitePatterns Protein kinases ATP-binding region signature. 792 815 IPR017441 GO:0005524
Lal6g0777 1130 SMART LRR_typ_2 416 440 IPR003591 -
Lal6g0777 1130 SMART LRR_typ_2 296 320 IPR003591 -
Lal6g0777 1130 SMART LRR_typ_2 151 175 IPR003591 -
Lal6g0777 1130 SMART LRR_typ_2 560 584 IPR003591 -
Lal6g0777 1130 SMART LRR_typ_2 656 681 IPR003591 -
Lal6g0777 1130 SMART LRR_typ_2 488 511 IPR003591 -
Lal6g0777 1130 SMART LRR_typ_2 536 559 IPR003591 -
Lal6g0777 1130 SUPERFAMILY Protein kinase-like (PK-like) 774 1064 IPR011009 -
Lal6g0777 1130 Gene3D Transferase(Phosphotransferase) domain 1 873 1086 - -
Lal6g0777 1130 Pfam Leucine rich repeat N-terminal domain 43 77 IPR013210 -
Lal6g0777 1130 SMART serkin_6 786 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0777 1130 ProSiteProfiles Leucine-rich repeat profile. 635 657 IPR001611 GO:0005515
Lal6g0777 1130 ProSiteProfiles Leucine-rich repeat profile. 418 440 IPR001611 GO:0005515
Lal6g0777 1130 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 19 1126 - -
Lal6g0777 1130 Gene3D Phosphorylase Kinase; domain 1 772 872 - -
Lal6g0777 1130 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 19 1126 - -
Lal6g0777 1130 ProSiteProfiles Protein kinase domain profile. 786 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0777 1130 Gene3D Ribonuclease Inhibitor 231 336 IPR032675 -
Lal6g0777 1130 Gene3D Ribonuclease Inhibitor 337 436 IPR032675 -
Lal6g0777 1130 Gene3D Ribonuclease Inhibitor 437 707 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0777 Lal-Chr6 5220151 5224581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0777 34 1083 Receptor kinase-like Gene Family AT5G56040 47.324 0.0 939
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal6g0777 Pkinase 4.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0777 - - mtr:MTR_5g045910 1758.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0777 6 5220151 5224581 Lal18g0936 18 12175457 12179632 LSH