Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0769 ATGTATACTTGTGTGGTGACTATTGGTTTTAGCATGGGGAAGACACTTGAGAGGTATCACAGATGCAGTTATGAATCCTTGGAAGTACAGAACCAACCTGCAATGGAGACACAGAAGCGATACCAAGAGTATCTCAAGCTGAAATCAAAAGTTGAGGAATTACAACGTACGCAGAGAAATTTCCTTGGGGAAGAATTGGAGCACTTAGATATCAAGGAGCTTGAGCACCTTGAACATCACCTGGACTCTTCATTAAAGCAAATCAGGTCTAACAAGACACAACATATGCTTGATCAACTGGCTGATCTGAAAACTAAGTGGGAGGAAATTAATATAGCCCTTCAACCAACATGGGAGCAAAATGCTAGGGAGCATAATGCACCATACAACCACCACCCTCCCACATCAGAGGGATACTATGAGACAGCACATTGTAATAGTACCTTGGCTTATTCCTCATTGTTTCTCAACAGCAGCGGTTCTGCGGCAACAAATAAAGCAGGAGGAGCTCCTGGAACCTCAGCACAGAATACTAGGACGGAGTGA 546 0.4359 MYTCVVTIGFSMGKTLERYHRCSYESLEVQNQPAMETQKRYQEYLKLKSKVEELQRTQRNFLGEELEHLDIKELEHLEHHLDSSLKQIRSNKTQHMLDQLADLKTKWEEINIALQPTWEQNAREHNAPYNHHPPTSEGYYETAHCNSTLAYSSLFLNSSGSAATNKAGGAPGTSAQNTRTE 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0769 181 ProSiteProfiles K-box domain profile. 37 124 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lal6g0769 181 PANTHER MADS BOX PROTEIN 10 154 - -
Lal6g0769 181 Pfam K-box region 35 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lal6g0769 181 PANTHER MADS-BOX TRANSCRIPTION FACTOR FAMILY PROTEIN 10 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0769 Lal-Chr6 5154631 5165704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0769 11 155 MADS-box Gene Family AT5G15800 47.853 4.99e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0769 K09264 - gmx:100811049 209.534