Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0751 ATGGAAGACAGTGTGCCAAAAGTTGCACAGGATCAGAAATGGGGAGAGTTGGATATGAGTGAAAAAGAAAAGTTTGAGCTGGACAAAAACCAGGATCCTATGAGTTATTCAAGTGGTATGAACTTGGATTGGAGATTTGGGGATGCAAATCCTCCAAATTCATCTTTGGGTTTGGTTGCCATGGGTAATTCTGTGAATGTTAGCAGAGGGGATCTTATTGGTTCTTCTTCATGTTCCTCTGCCTCAATGGTGGATTCATTTGGTCCAAACTTTTGGGACCATCCACCCAATACCCAAAACATGGGATTTTGTGACATTAATGTCCATAACAATGGGAGCTCTTCAAACACAGTTGGAATTGGAAGAGCTGGTCATCATCATGGAGCAGTTGAAATGGGTTGGAACCCAGGTAATCCTATGTTGAAGGGTGATGGTTTTATACCAAATGGACCAGGGATGTTTCCACATAGTTTATCTCAGTTTCCAACTGACTCTGGATTTATTGAGCGGGCTGCGAGATTCTCATGCTTCGGTGTGGGGAATTTTGGTGAAATGGTGAACTCATTTGGGGTTCCTCAATCCATGGGTCTGTATGCTGGGACAGATGGTGTTACAATTCAAGGAACAAGGAATGCTCTTGCTGGGCTTGGATTAAAATCAGCCCCTGGAGGACAATCTCAAGATAACAGTCTGAATGTGGCTGAAGCTGCAAAAGATGTGCCTCTGTCTGTTGATCATCTCGCTACTAAAGGAAGCCCACTCAAGAATGATAAAAGAAGCGAAACTCGTGGCATATCTCAAGATGAAGGGAAACACTCTCTTTTTAGGCATGCTAATGAGTCTGATAGAGCTGAATCTAGTGATGATGATGGTGGTGGTGGTGGTGATGGCCAAGATGATTCCCCAATGTTGGAGGGTACTAGTGGAGAACCATCTATTAAAGGACTAAACTCAAAGAAAAGGAAAAGAATTGGGCAGGATGTAGATAATGATGAAGGCAACGGAGCTCCAAAACTACTTGGTGAAGGTGCAAAGGATGACCATGAGAGTCCACAGAAGGGAGACCAGCCACCAAATTCAACAACCAAGGCTTCTGGTAAGAATACCAAACAAGTGTCTCAAGCTTCTGATCCACCTAACGAGGATTACATACATGTTAGGGCTCGTCGGGGTCAAGCAACAAATAGCCACAGCCTTGCAGAGAGAGTGAGGAGGGAAAAGATAAGCGAAAGGATGAAATTCCTTCAAGACCTTGTACCTGGATGCAGCAAGGTCACTGGCAAGGCAGTTATGTTAGATGAAATCATTAACTATGTACAGTCACTTCAAAGACAAGTTGAGTTTTTGTCAATGAAACTTGCAACAGTAAATCCAAGGCTGGATTTTAATGTTGAGGGACTTCTTGCTAAAGATATTCTTCACCAGCGGCCTGGTCCTTCATCTGCCCTGGGGTTTCCTCTAGAAATGTCTATGGCTTACCCTCCATTACATCCATCTCAACCAGGGCTGATGCAGTCATCTCTTCCCAGTATGGCAAACACATCTGATATCCTTCGTAGAACCATTCACCCACAGTTGGCACCCTTTAGTGGAGGATTCAAGGAGCCAAATCAGCTGCCTGATGTGTGGGAGGATGAGCTTCACAATGTTGTACAGATGAGCTATGCACCAAATGCACCCTTGAGCAGCCAAGATGTGGATGGTAATGTGCCAGCAAATCAGATGAAAGTTGAACTTTGA 1740 0.442 MEDSVPKVAQDQKWGELDMSEKEKFELDKNQDPMSYSSGMNLDWRFGDANPPNSSLGLVAMGNSVNVSRGDLIGSSSCSSASMVDSFGPNFWDHPPNTQNMGFCDINVHNNGSSSNTVGIGRAGHHHGAVEMGWNPGNPMLKGDGFIPNGPGMFPHSLSQFPTDSGFIERAARFSCFGVGNFGEMVNSFGVPQSMGLYAGTDGVTIQGTRNALAGLGLKSAPGGQSQDNSLNVAEAAKDVPLSVDHLATKGSPLKNDKRSETRGISQDEGKHSLFRHANESDRAESSDDDGGGGGDGQDDSPMLEGTSGEPSIKGLNSKKRKRIGQDVDNDEGNGAPKLLGEGAKDDHESPQKGDQPPNSTTKASGKNTKQVSQASDPPNEDYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNVEGLLAKDILHQRPGPSSALGFPLEMSMAYPPLHPSQPGLMQSSLPSMANTSDILRRTIHPQLAPFSGGFKEPNQLPDVWEDELHNVVQMSYAPNAPLSSQDVDGNVPANQMKVEL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0751 579 CDD bHLH_AtBPE_like 382 467 - -
Lal6g0751 579 MobiDBLite consensus disorder prediction 1 30 - -
Lal6g0751 579 MobiDBLite consensus disorder prediction 354 378 - -
Lal6g0751 579 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 28 578 IPR024097 GO:0006355
Lal6g0751 579 PANTHER BHLH TRANSCRIPTION FACTOR 28 578 - -
Lal6g0751 579 SMART finulus 398 448 IPR011598 GO:0046983
Lal6g0751 579 MobiDBLite consensus disorder prediction 315 329 - -
Lal6g0751 579 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 390 461 IPR036638 GO:0046983
Lal6g0751 579 MobiDBLite consensus disorder prediction 251 290 - -
Lal6g0751 579 MobiDBLite consensus disorder prediction 1 33 - -
Lal6g0751 579 MobiDBLite consensus disorder prediction 244 381 - -
Lal6g0751 579 Gene3D - 389 462 IPR036638 GO:0046983
Lal6g0751 579 MobiDBLite consensus disorder prediction 558 579 - -
Lal6g0751 579 Pfam Helix-loop-helix DNA-binding domain 395 443 IPR011598 GO:0046983
Lal6g0751 579 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 392 442 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0751 Lal-Chr6 5002056 5006072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0751 17 555 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 45.138 2.85e-119 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal6g0751 HLH 7.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0751 - - lang:109340340 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0751 6 5002056 5006072 Lal6g0751 6 5002056 5006072 ECH