Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0747 ATGATTCCAAGTGAAATGAGAGGAACCCATTATCTAGCACCTGATAATCAAAATCAATTCCTAGTTCCAACCAACTTTTCCTTGATGCAGAGTGATATCCCAAACTTCCATCTGAATAGTCTCTTAAACAACTTACCAAACTACCATTACCCTTCTTTAGGCCATGAACTTGTCCCTCTTTCATATCTTAGCAGCAACTCAACAACTTCTGATGAAGCTGATGAACTTAATCTAAACATCATTGATGAAAGGAAACAAAGAAGAATGATATCAAATAGAGAATCTGCTCGCAGGTCAAGGATGAGGAAGCAAAAACACTTGGATGAACTATGGTCACAGGTTGTTAGACTCAGAACTGAGAATCACAAACTTGTTGATAAACTTAACAATGTTTCTGAGTCCCATGATAAGGTTCTTCAAGAGAATGTACTATTGAAGGAACAAGCTTCTGATCTTCGACAAATGCTATCAGACATGCAAATTGGTAATTCTTTTGCTTCAACATTCAGAGATTTTGATGAAGTTCCAATTCATGCATCTCAACTCAAAGCTGAATCTTCAAACCAATCAAACACTTCTTTGGATTTGGTTAACTAA 597 0.3635 MIPSEMRGTHYLAPDNQNQFLVPTNFSLMQSDIPNFHLNSLLNNLPNYHYPSLGHELVPLSYLSSNSTTSDEADELNLNIIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHKLVDKLNNVSESHDKVLQENVLLKEQASDLRQMLSDMQIGNSFASTFRDFDEVPIHASQLKAESSNQSNTSLDLVN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0747 198 SUPERFAMILY Leucine zipper domain 84 133 IPR046347 GO:0003700|GO:0006355
Lal6g0747 198 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 193 IPR044521 -
Lal6g0747 198 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Lal6g0747 198 Gene3D - 82 137 - -
Lal6g0747 198 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Lal6g0747 198 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Lal6g0747 198 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Lal6g0747 198 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Lal6g0747 198 PANTHER BZIP PROTEIN (ATBZIP48) 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0747 Lal-Chr6 4954092 4954688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0747 63 177 bZIP Transcription Factor Family AT3G30530 72.650 2.14e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal6g0747 bZIP_1 2.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0747 - - gmx:778126 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1745 13 17018270 17018803 Lal6g0747 6 4954092 4954688 PCT
Lal24g1319 24 14528503 14529102 Lal6g0747 6 4954092 4954688 PCT
Lal6g0747 6 4954092 4954688 Lal13g1745 13 17018270 17018803 PCT
Lal6g0747 6 4954092 4954688 Lal24g1319 24 14528503 14529102 PCT