Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0735 ATGGCCCCAAAATCAAAAACAAGCTCCACCACTATTCATCTATCTCTTATGGTAGTTATTGTCATAGCTAATGTTGTTTTTGCTGATGACAATGCTCCTATTCCAGCTGACAAGGCCCAATTGGATAAGTGGTACAATCAACATGTGCAACCTTTAGCTCAAAGAAAGGGTACCTTAGACCCTGCAGTGGTAGCTGCAGAGGGTGCTGTTTCGGTTATCAAGGTCTCGCAAGATGGTAGTGGAAAATTCAAGTCCATCAATGAAGCAATTAAGAGCATTCCTAAAGGGAACACTAAGCGAGTGATTGTATATATCGGTGCTGGAACTTATAATGAGAAAATAAGGATTGAGAGAGAAAAACCTTTTATTACTTTGTGTGGAGCTCCAGGAAAAATGCCAAACTTGACTTATGGGGGCACTGCACTCAAATATGGCACTGTTGATAGTGCTACCTTAATTGTTGAATCAGATTACTTTGTGGCCTCCAATTTGGTTATTTCGAATTCTTCACCAAAACCGGATGGAAAGACGGAAGGAACTCAAGCACTTGCATTGAGAATTTCTGGTGACAAAGCAGCATTCTATAAAGTTACATTATTGGGATTCCAGGACACATTATGTGATGATGCAATTTGGCATATTTACAAAGATTGTGTGATTCAAGGCACTGTTGATTTTGTTTTTGGAAATGGAAAGGCACTATTTTTGAACACTGTGATAAGAGAACTTGGCGAATCAGGGATGTCAGTAATAACAGCACAAGGAAAAGATAAAAAGACAGATGATACTGGATTCTCATTTGTGCTTTGTGACGTAACTGGGTCTGGAACCGGCACTCTTTTGGGAAGAGCATGGATGTCTAGATCTAAAGTGGTCTTTGCTTATTGCAATATAGGCAGTATTGTAAATGCAACAGCATGGAGTAACAACAATCATCCTGAATTTGACAAGGATGTATATTTTGGAGAGTATAAGAATAAGGGACCTGGTGCAGATACAAAAGGGCGTTACAAGTTTACAAAAATACTTTCTGATGCAGAGGCGAAACCTTTTATAACACTTGGCTATATTGAAGGTTCAAAATGGCTACTTCCTCCTCCAAATCCTATAGTGTAA 1116 0.3916 MAPKSKTSSTTIHLSLMVVIVIANVVFADDNAPIPADKAQLDKWYNQHVQPLAQRKGTLDPAVVAAEGAVSVIKVSQDGSGKFKSINEAIKSIPKGNTKRVIVYIGAGTYNEKIRIEREKPFITLCGAPGKMPNLTYGGTALKYGTVDSATLIVESDYFVASNLVISNSSPKPDGKTEGTQALALRISGDKAAFYKVTLLGFQDTLCDDAIWHIYKDCVIQGTVDFVFGNGKALFLNTVIRELGESGMSVITAQGKDKKTDDTGFSFVLCDVTGSGTGTLLGRAWMSRSKVVFAYCNIGSIVNATAWSNNNHPEFDKDVYFGEYKNKGPGADTKGRYKFTKILSDAEAKPFITLGYIEGSKWLLPPPNPIV 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0735 371 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Lal6g0735 371 SUPERFAMILY Pectin lyase-like 72 365 IPR011050 -
Lal6g0735 371 Gene3D - 69 366 IPR012334 -
Lal6g0735 371 PANTHER PECTINESTERASE 63-RELATED 38 364 - -
Lal6g0735 371 Pfam Pectinesterase 73 359 IPR000070 GO:0030599|GO:0042545
Lal6g0735 371 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 38 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0735 Lal-Chr6 4899743 4901498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0735 17 367 Carbohydrate Esterase AT5G07410 54.986 3.24e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0735 K01051 - gmx:100813174 501.13