Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0729 ATGAACACCATGGTAGATATCATTTCTACAAGTTCCATCAAAGTAGAGAGTGATGTCTATGGTGACTCATCATCACCTAAGATAATCCATTTAACTCCATGGGATCTGACATGCTTATCATATGAGACAAACAGAAAAGGCTTACTTTTTAACAACCCTATCAACATAGAACACCAAATCCAACATATCAAACAATCCCTTTCTTCCACTCTAGCTTTCTTTCCACCACTTGTTGGACGTCTTGTAATCCTCCAACATGATGAAGACAACACTGTTTCCTCTCACATCCTTTGCAACAACGAAGGTGCCCTTTTTGTCCATGCTGTTGTTTCTGATAACACTTGTGTTTCTGACATCCTTCACTCCAACTATGTTCCTCCCTTTCTCCCTTCTTTCTTTCCTTTCATTGGTGTTAGAAACTATGAAGGCACTTCACAACCATTGCTTGCAGTGCAAATAACGGAGCTTGCTGATGGCATCTTCATTGGTATCTCAATGAATCATGTAGTTGCGGATGGTAAGTCATTATGGCATTTCATTAATTCATGGGCTGAAATCTCACGAGGTTGTGATGAAGTGTCCAAACTCCCATCACTTGAGCGTTGGTTTCTCCATCCCAATCGCTGTCCTATAAGATTTCCTTTCAATGAAGAACACCAAATGGAAAACTCTGAGTATTGCACCAATTATCAAAGGGTTTTCCATTTCACCAAGGTGAAAATCGCAAAAATCAAATCAAAAGCTAATGCAGAAGTCGGCGTGGACAAAATATCTTCTCTCCAAGCACTCTTAACTCACCTTTGGCGCACTGTGATCCGTAACCAACAACTTGACCCAGAAAAAGAGTGCAACTATGGCTTAGCGATAGATGTTAGAGGGAGAATAGTTCCACCATTGCCTGATAGTTATTTTGGAAATGCATTGATTATTGATGCTATTAGAATGAAAGCTGGAGAACTACTACAAGAAGGTGGGCTAGGAAAAGGTGCATTGGAGATGCATAAGATGATAACTTCCTACTCTGATGAGAGGTTGAAGATTCTCTATGGATCTTGGGTGGGACCTCCAAAGATGTTTGAGTTAGGTGGGATAAGTAATATGTTGAGAACTAGCAGTTCTCCAAGGTTCAATGTTTATGGTAATGACTTTGGTTGGGGGAAACCTGTGGCAGTTAGAAGTGGTAGTACAATGAATGGATTCACTACTTTGTTTGTTGGGGCTGAAGAGGGTAGTATTGACCTTACAGTGTGCCTTCCTTATGAGGTTTTGGAGGCCATGGGAAATGACCCTCACTTCATGGATCCCTTTTCCATCTAA 1317 0.4085 MNTMVDIISTSSIKVESDVYGDSSSPKIIHLTPWDLTCLSYETNRKGLLFNNPINIEHQIQHIKQSLSSTLAFFPPLVGRLVILQHDEDNTVSSHILCNNEGALFVHAVVSDNTCVSDILHSNYVPPFLPSFFPFIGVRNYEGTSQPLLAVQITELADGIFIGISMNHVVADGKSLWHFINSWAEISRGCDEVSKLPSLERWFLHPNRCPIRFPFNEEHQMENSEYCTNYQRVFHFTKVKIAKIKSKANAEVGVDKISSLQALLTHLWRTVIRNQQLDPEKECNYGLAIDVRGRIVPPLPDSYFGNALIIDAIRMKAGELLQEGGLGKGALEMHKMITSYSDERLKILYGSWVGPPKMFELGGISNMLRTSSSPRFNVYGNDFGWGKPVAVRSGSTMNGFTTLFVGAEEGSIDLTVCLPYEVLEAMGNDPHFMDPFSI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0729 438 Gene3D - 228 428 IPR023213 -
Lal6g0729 438 Pfam Transferase family 26 431 - -
Lal6g0729 438 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 435 - -
Lal6g0729 438 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 7 435 - -
Lal6g0729 438 Gene3D - 2 226 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0729 Lal-Chr6 4864026 4865342 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0729 61 424 Monolignol Biosynthesis Gene Families AT5G48930 27.132 1.20e-29 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0729 - - gmx:100500257 483.026