Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0727 ATGGCAGTGGTAGATATCATTTCCACAAGTTTTATCCAAGCAGAGAGTGATGTGTATGGTGACCCATCATCACCTAAGATAATCCATGTAACTCCATGGGATCTAACATACATAGCATTTGAGACAAACAGAAAAGGCTTACTTTTTAACAACCCTATCAATATAGAACCCCAAATCCAACATCTCAAACAATCCCTTTCTTCCACTCTTGCTTTCTTTCCACCACTTGCTGGCCGTCTTGTAATCCTCCAACATGATGAGGACAACACTGTTTCCTCTCACATCCTTTGCAACAACGAAGGTGCCCTTTTTGTCCATGCTGTTGTTTCTGATCAAATTTGTGTTTCTGACATCCTTCAATCCAACTATGTTCCTCCCTTTCTCCATTCTTTCTTTCCTCTCACTGGTGTTAAAAACTATGATGGCACTTCACAACCATTGCTTGCAGTGCAAATAACGGAGCTTGTTGATGGCATCTTCATTGGTATCTCAATGAATCATGTAGTTGCGGATGGTAAGTCATTATGGCATTTCATTAATTCATGGGCTGAAATCTCACGAGGTTGTGAGGTAGTGTCCAAACTCCCATCACTTGAGCGTTGGTTTCTCCATCCCAACCGTTGTCCTATAAGATTTCCTTTCAATGAAGAAGACCAAATGGAAAACTCTGAGGATTGCACCTATTATCAACGCATTTTCCATTTTACCAAGGAGAAAATCGCAGAAATCAAATCAAAAGCTAATGCAGAAGCTGGCACAAACAAAATATCTTCTCTCCAAGCTCTCTTAACTCACCTTTGGCGCACTGTGATTCATAACCAACAATTAGATCCAGAAAAAGAGTGCATCTATGTCTTTATGATAGACGTTAGAGGGAGAATAGTTCCACCATTGCCAGATAATTATTTTGGAAACGCATTAGCCTTTGGTATTATTGGAATGAAAGGAGGAGAGTTACTACTAGAAGGTGGGCTAGGAAAAGGTGCATTGGAGATGCATAAGATGATAACTTCCTACTCTGATGAGAAGTTGAAGATTCTCTATGAGTCTTGGGTGAGACCTCCAAATATGTATAGTTCAGGTAGGTTAAGTAATATGTTGGCCACAAGCAGTTCTCCAAGGTTCAATGTTTATGGAAATGACTTTGGTTGGGGAAAACCTTTGGCAGTTAGAACTGACAATTCAATGAATGGAATCACGACTTTGTTTGCTGGGGCTGAAGAAGGTAGTATTGACCTTACGCAAAGGTGTAATTACACCTGCATTATTTTAGGTGCCCTTTTTGTCCATGCTGTTGTTTCTGATAACACTTGTGTTTCTGACATCCTTCACTCCAACTATGTTCCTCCCTTTCTCCCTTCTTTCTTTCCTTTCATTGGTGTTAGAAACTATGAAGGCACTTCACAACCATTGCTTGCAGTGCAAATAACGGAGCTTGCTGATGGCATCTTCATTGGTATCTCAATGAATCATGTAGTTGCGGATGGTAAGTCATTATGGCATTTCATTAATTCATGGGCTGAAATCTCACGAGGTTGTGATGAAGTGTCCAAACTCCCATCACTTGAGCGTTGGTTTCTCCATCCCAATCGATGTCCTATAAGATTTCCTTTCAATGAACAAGAACAAAAGGAAAACTCTAAGGATTGCACCAATTATGAACGGGTTTTCCATTTCACCAAGGAGAAAATCGCAAAAATCAAATCAAAAGCTAATGCAGAAGCCGGCGTGGACAAAATATCTTCTCTCCAAGCTCTCTTAACTCACATTTGGCGCACTGTGATCCGTTACCAACAACGTGACCCAGAAAAAGAGTGCAACTATATCTTAGTGATAGATGTTAGAGGGAGAATAGTTCCACCATTGCCCGATAGTTATTTTGGAAATTCATTGATTATTGATACTGTTAGAATGAAAGCAGGAGAGCTACTACTAGAAGGTGGGCTAGGAAAAGGTGCATTAGAGATGCATAAGATGATAGCTTCCTACTCTGATGAGAAGTTGAAGATTCTCTATGAGTCTTGGGTGAGACCTCCAAATATGTATAGTGCAGCTGAGTTAAGTAATATCTTGGCCACAAGCAGTTCTCCAAGGTTCAATGTTTATGGAAATGACTTTGGTTGGGGAAAACCTTTGGCAGTTAGAAATGACAATTCATTGAATGGAGTCACTACTTTGTTTCCTGGGGCTGAAGAAGGTAGTATTGACCTTACAGTGTGCCTTCCATATGAGGTTTTGGAGGCCATGGGAAATGACCCTCACTTCATGGATCCCTTTTTCATCTAA 2286 0.4042 MAVVDIISTSFIQAESDVYGDPSSPKIIHVTPWDLTYIAFETNRKGLLFNNPINIEPQIQHLKQSLSSTLAFFPPLAGRLVILQHDEDNTVSSHILCNNEGALFVHAVVSDQICVSDILQSNYVPPFLHSFFPLTGVKNYDGTSQPLLAVQITELVDGIFIGISMNHVVADGKSLWHFINSWAEISRGCEVVSKLPSLERWFLHPNRCPIRFPFNEEDQMENSEDCTYYQRIFHFTKEKIAEIKSKANAEAGTNKISSLQALLTHLWRTVIHNQQLDPEKECIYVFMIDVRGRIVPPLPDNYFGNALAFGIIGMKGGELLLEGGLGKGALEMHKMITSYSDEKLKILYESWVRPPNMYSSGRLSNMLATSSSPRFNVYGNDFGWGKPLAVRTDNSMNGITTLFAGAEEGSIDLTQRCNYTCIILGALFVHAVVSDNTCVSDILHSNYVPPFLPSFFPFIGVRNYEGTSQPLLAVQITELADGIFIGISMNHVVADGKSLWHFINSWAEISRGCDEVSKLPSLERWFLHPNRCPIRFPFNEQEQKENSKDCTNYERVFHFTKEKIAKIKSKANAEAGVDKISSLQALLTHIWRTVIRYQQRDPEKECNYILVIDVRGRIVPPLPDSYFGNSLIIDTVRMKAGELLLEGGLGKGALEMHKMIASYSDEKLKILYESWVRPPNMYSAAELSNILATSSSPRFNVYGNDFGWGKPLAVRNDNSLNGVTTLFPGAEEGSIDLTVCLPYEVLEAMGNDPHFMDPFFI 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0727 761 Gene3D - 550 751 IPR023213 -
Lal6g0727 761 Gene3D - 2 211 IPR023213 -
Lal6g0727 761 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 417 758 - -
Lal6g0727 761 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 21 414 - -
Lal6g0727 761 Pfam Transferase family 27 396 - -
Lal6g0727 761 Pfam Transferase family 412 754 - -
Lal6g0727 761 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 417 758 - -
Lal6g0727 761 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 21 414 - -
Lal6g0727 761 Gene3D - 412 547 IPR023213 -
Lal6g0727 761 Gene3D - 214 411 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0727 Lal-Chr6 4850367 4856159 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0727 416 747 Monolignol Biosynthesis Gene Families AT5G48930 25.281 8.68e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0727 - - gmx:100500257 455.292