Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0683 ATGAGATTGAGTTGCAATGGGTGCCGCATTCTCCGTAAAGGGTGCAGTGATGACTGCATCATAAGGCCTTGCCTTGAGTGGATCAACTCTCCTGAGTCACAAGCCAATGCCACTCTCTTTCTTGCCAAATTCTATGGCCGTGCTGGCTTGCTTAACCTCATCAATGCTGCTCCTCAACCACTTCGCCCAGCCGTATTCAAGTCACTAATGTATGAGGCATGCGGAAGAATAGTGAACCCGGCTTTTGGGTCACTTGGTTTATTCTGGACCGGAGAGTGGGCCCAATGCCAAGCTGCGGTTGATGCTGTGCTGAATGGGTCCGAGATCAGTGCTGTGGAACTTTCTGATTGGCAAGTGACATCTGGCAGCAAGCATGTTTTCCCAGCCCATGATATACGCCACGTGTCCAGAGATAGTCACGTGGACCAGCTGAGAGGAGGAAAGCCTCGGTTCAAGAGAACCGGGAATGTGATCAAGCCCAAAGCACGAGTTGGTTCATTTGATTCGGCCGGGCTTTGGAGCCATGGGCTGAGAAACAAAGAGGGTTGGGAAACTGAGAGCGATCAAACCGTGGAGGCTTCGCTGATGAGCCAAGATGAGCCCAACCAAACAGGTGAAGCAAGGGTGGATTTGGAACTCACTCTTGGCTAA 651 0.5146 MRLSCNGCRILRKGCSDDCIIRPCLEWINSPESQANATLFLAKFYGRAGLLNLINAAPQPLRPAVFKSLMYEACGRIVNPAFGSLGLFWTGEWAQCQAAVDAVLNGSEISAVELSDWQVTSGSKHVFPAHDIRHVSRDSHVDQLRGGKPRFKRTGNVIKPKARVGSFDSAGLWSHGLRNKEGWETESDQTVEASLMSQDEPNQTGEARVDLELTLG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0683 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 216 - -
Lal6g0683 216 PANTHER LOB DOMAIN PROTEIN 1 216 - -
Lal6g0683 216 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Lal6g0683 216 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0683 Lal-Chr6 4481592 4482661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0683 1 216 AS2 family AT1G68510 48.750 2.00e-66 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal6g0683 LOB 3.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0683 - - gmx:100779034 275.404