Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0675 ATGAAACCTCATATTTTGTTAATCCTAAACTTCTTAGTTCTTATCATCACCCTTTGGTCACAAGATTCTGTTGGTTCACACAATCCAAAGTTTACAGCATGTCAACCTAAAACATGCGTCAATAATAACCAAACTATAAGCTACCCTTTCTATATTGAAGGAATACAAGAACCCTTTTGCGGGTACCCTGGTTTTGGCCTCTCTTGTAACAAAGATGGCTTCCCATTTCTCAACATGTCTCATTCCCAATACATTATCCATGAAATATTCTACAACAATCACTCACTAAGAGTGTCTAATGCTGCATTTTCTAGATTAAACACTACAACTTGTCTTCCTCGTACACAGAATCTTACTCTTTCTGGTACTAGGTTGGCTCTTAGTCCCAACCAAAAGGATATGTTCTTGTTCTTTGGATGTGAGTTTGAATGGTCGCAACTGCAAGAGCGCAAAATCGGGTGTTCTGCTGAGAATGGAACAGGTTCAGTTGTGGCCTTGTATAGGGAGGATCAAAATTTGAGGTCTGCATTGATGAAATGCAAGGGTGGAGTGGTGAATATGACAGTGGAAAGTGAGAAAGGAGGGATTCAAGAGGCATTGAGGAGAGGGTTCATGATGACTTGGAAGGTGAGTGATTGCAACAAGTGCATGAATAGTGGAGGAAAGTGTGGATTTGACACAGAAATATATAGTTTCAGGTGTTACTGCCGTCATGATACTCATGCTCGGAAATGTTCCTCAGAAGAATCTGGAAAACCGGTTGTCATACTAGCAACAGTTTCTGCAGCTGCGGGATTTGGACTTCTAGTTATTATTATAATCTACTGCTATAGAAGAAAACTATTGTGTAGATTCTGGAAGGAGAAATCTAGAGTTAATCAAGATTTTGAGACCTTCCTCAGGAATTATGGGCCAATTGCAGTAAGAAGATATAGCTACATGGAAATAAAGAAAATGACCAATGCTTTCAAAGAAAAGTTAGGCCAAGGAGGGTATGGAAGTGTTTTCAAAGGGAAGTTAGAAGATGGATCTTTAGTTGCTGTTAAGGTTCTGAGTGAATTGAAAGGCAATGGAGAAGAATTTATCAATGAGGTAGCAAGTATTAGCAAGACTTCTCATGTGAACGTTGTCACTCTTATAGGATTTTGTTCTGAAGAATCCAAAAAGGCTCTGGTCTATGAGTATATGGCTAATGGATCTTTAGAGAAGTTTATATATGAGACTAACAACTTAACAGCTGATTACCAATTGAATTGTGAAATGTTATATCAAATCGCAATCGGCGTCGGCCGAGGACTAGAGTACTTGCATAGAGGATGCAACACTAGAATATTTCACTTCGACATAAAGCCTCACAACATACTGTTAGATGAGATGTTTTGTCCCAAGATATCGGATTTTGGACTTGCGAAAATATGTCCGAGAAATGAGAGTGTTGTGTCCATGTTGGTTGCTAGAGGAACTATAGGATACATTGCTCCTGAGGTATTTTGTAGAAATATTGGAGTTGTGTCTTACAAATCAGATGTGTACAGTTTTGGAATGCTGGTGCTAGAAATGGTTGGGGGAAGAAAGAATATCAATGTTGAAGTTGAGTGTACGAGTGAAATATATTTTCCTTATTGGATTTATAAGCGTATTGAACTAAATGAAGAGCTTTCATTGAGGAATGTTATGAATGAAAGTGACAGAGACAATATAAAAAAGATGATACTAGTAAGTTTGTGGTGTATTCAAACTAACCCTTCAGATCGTCCAACAATGCATAGAGTGGTGGAGATGCTTGAAGGGAATGTTGAAACCTTACAAGTACCACCAAAACCTTTCTTGTCATCTCCTTCACTTTCACCTCACTCTTCCCCATCTCATTGA 1872 0.3846 MKPHILLILNFLVLIITLWSQDSVGSHNPKFTACQPKTCVNNNQTISYPFYIEGIQEPFCGYPGFGLSCNKDGFPFLNMSHSQYIIHEIFYNNHSLRVSNAAFSRLNTTTCLPRTQNLTLSGTRLALSPNQKDMFLFFGCEFEWSQLQERKIGCSAENGTGSVVALYREDQNLRSALMKCKGGVVNMTVESEKGGIQEALRRGFMMTWKVSDCNKCMNSGGKCGFDTEIYSFRCYCRHDTHARKCSSEESGKPVVILATVSAAAGFGLLVIIIIYCYRRKLLCRFWKEKSRVNQDFETFLRNYGPIAVRRYSYMEIKKMTNAFKEKLGQGGYGSVFKGKLEDGSLVAVKVLSELKGNGEEFINEVASISKTSHVNVVTLIGFCSEESKKALVYEYMANGSLEKFIYETNNLTADYQLNCEMLYQIAIGVGRGLEYLHRGCNTRIFHFDIKPHNILLDEMFCPKISDFGLAKICPRNESVVSMLVARGTIGYIAPEVFCRNIGVVSYKSDVYSFGMLVLEMVGGRKNINVEVECTSEIYFPYWIYKRIELNEELSLRNVMNESDRDNIKKMILVSLWCIQTNPSDRPTMHRVVEMLEGNVETLQVPPKPFLSSPSLSPHSSPSH 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0675 623 Pfam Wall-associated receptor kinase C-terminal 176 237 IPR032872 -
Lal6g0675 623 ProSiteProfiles Protein kinase domain profile. 321 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0675 623 SUPERFAMILY Protein kinase-like (PK-like) 299 596 IPR011009 -
Lal6g0675 623 Pfam Wall-associated receptor kinase galacturonan-binding 34 99 IPR025287 GO:0030247
Lal6g0675 623 PANTHER - 22 616 - -
Lal6g0675 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Lal6g0675 623 MobiDBLite consensus disorder prediction 604 623 - -
Lal6g0675 623 SMART serkin_6 321 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0675 623 Gene3D Transferase(Phosphotransferase) domain 1 396 604 - -
Lal6g0675 623 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Lal6g0675 623 Gene3D Phosphorylase Kinase; domain 1 299 395 - -
Lal6g0675 623 Pfam Protein kinase domain 324 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0675 623 MobiDBLite consensus disorder prediction 605 623 - -
Lal6g0675 623 PANTHER RUST RESISTANCE KINASE LR10-RELATED 22 616 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0675 Lal-Chr6 4421073 4424297 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0675 34 608 Receptor kinase-like Gene Family AT5G38260 40.299 4.35e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lal6g0675 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0675 - - lang:109359375 1171.76