Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0669 ATGGGAAACAATGAGGAAGGGAAATCCATTAAGAGTGAAAAGCCTTCTTCACTGGGTCAGGCTAATCAGGCCAACCAGCCTGGTGTTCATCTCTATCCTGATTGGGCTGCCATGCAGGCATATTATGGTCCAAGATTCAGCATTCCTCCATATTATAACCCGGATATGGCTTCTGGTCATGCTCCTCACCCATACATGTGGGGTCCACAGCCTATGATGTCACCATATGGGGCCCCTTATGCAGCAATTTATCCACATGGAGGGGTTTATACTCACCCTGCCGTTGCTATGGGGCCACATTCACACGGCCAAGGAGTTTCATCTTCACCTGCTGCTGGAACTCCTTCAAGCATCGAGACACCAACCAAAATTTCTGGAAACACTGATAAGGGTTTAATGAAGAAACTGAAAGGGTTTGATGGGCTTGCAATGTCAATAGGAAATGACAATGCTGGGAGTGCAGGACGTGGAGCGGAAAACAGACTGTCACAAAGTGTGGATACTGAGGGTTCGAGTGATGGGAGTGATGGCAACACTTCAGGGGCTAATCAATCGAAGAAAAGAAGCCGTGAGGAAACACCAACCACTGATGGAGAAGGAAAAACTGGGATGCAAGATAATCCAGTTTCTAAAGAAACTGCTTCCCTTAAGGTGATGCCAGTTACGCCAACCAGTTTTGCAGGAAAATTAGTTGGACCCACAGTTTCTTCAGGTATGACCACAGCACTGGAGCTGAGGAACCCTTCAGCTGTTAATTTTAAGGGAAATTCCAGAAGAGCCCCACAGCCTTGTGAAGTTTTGCCTCCTGAAGCTTGTTTACAGAATGAACGTGACCTGAAACGTGAGAGGAGGAAACAATCAAACCGTGAATCTGCTAGAAGGTCCAGACTAAGGAAGCAGGCTGAGGCTGAAGAATTAGCTCGAAAAGTTGATAACTTAAATGCTGAGAATGTATCACTTAAATCAGAAATAAATCAATTGGCTGAAAGTTCTGAGAAACTGAGGGTGGAAAATGCTACAATGATGGAAAAACTGAAAAATGTTCAAGTGGGGCAAGCAGAAGAGATCATTTTGAACAGCAATAACGTCCAGATGACGATACCTATAACTACAGAAAACTTACTATCAAGAGTTAATAATTCGGGTTCCGATGATATAACTGCAGAGGATGAGAATGATTTCGGTGAGAACAAATCGAAATCTGGGGCAAAGCTACATCAACTACTGGATAATCGTAGACCTAATGCTGTTGCAGCTGGTTAA 1263 0.4434 MGNNEEGKSIKSEKPSSLGQANQANQPGVHLYPDWAAMQAYYGPRFSIPPYYNPDMASGHAPHPYMWGPQPMMSPYGAPYAAIYPHGGVYTHPAVAMGPHSHGQGVSSSPAAGTPSSIETPTKISGNTDKGLMKKLKGFDGLAMSIGNDNAGSAGRGAENRLSQSVDTEGSSDGSDGNTSGANQSKKRSREETPTTDGEGKTGMQDNPVSKETASLKVMPVTPTSFAGKLVGPTVSSGMTTALELRNPSAVNFKGNSRRAPQPCEVLPPEACLQNERDLKRERRKQSNRESARRSRLRKQAEAEELARKVDNLNAENVSLKSEINQLAESSEKLRVENATMMEKLKNVQVGQAEEIILNSNNVQMTIPITTENLLSRVNNSGSDDITAEDENDFGENKSKSGAKLHQLLDNRRPNAVAAG 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0669 420 MobiDBLite consensus disorder prediction 392 407 - -
Lal6g0669 420 SMART brlzneu 276 340 IPR004827 GO:0003700|GO:0006355
Lal6g0669 420 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 420 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lal6g0669 420 MobiDBLite consensus disorder prediction 13 27 - -
Lal6g0669 420 CDD bZIP_plant_GBF1 281 329 IPR045314 GO:0003700|GO:0006355
Lal6g0669 420 MobiDBLite consensus disorder prediction 102 127 - -
Lal6g0669 420 MobiDBLite consensus disorder prediction 157 184 - -
Lal6g0669 420 Pfam Disordered region downstream of MFMR 129 254 - -
Lal6g0669 420 MobiDBLite consensus disorder prediction 380 420 - -
Lal6g0669 420 SUPERFAMILY Leucine zipper domain 279 334 IPR046347 GO:0003700|GO:0006355
Lal6g0669 420 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 278 341 IPR004827 GO:0003700|GO:0006355
Lal6g0669 420 Gene3D - 279 333 - -
Lal6g0669 420 Pfam bZIP transcription factor 276 338 IPR004827 GO:0003700|GO:0006355
Lal6g0669 420 MobiDBLite consensus disorder prediction 276 300 - -
Lal6g0669 420 MobiDBLite consensus disorder prediction 150 208 - -
Lal6g0669 420 Pfam G-box binding protein MFMR 1 95 IPR012900 -
Lal6g0669 420 MobiDBLite consensus disorder prediction 1 27 - -
Lal6g0669 420 Coils Coil 289 337 - -
Lal6g0669 420 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 283 298 IPR004827 GO:0003700|GO:0006355
Lal6g0669 420 PANTHER G-BOX-BINDING FACTOR 3 1 420 - -
Lal6g0669 420 MobiDBLite consensus disorder prediction 99 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0669 Lal-Chr6 4398563 4403827 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0669 1 420 bZIP Transcription Factor Family AT2G46270 49.531 7.18e-111 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal6g0669 MFMR_assoc 8.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0669 K09060 - gmx:778133 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0669 6 4398563 4403827 Lal6g0669 6 4398563 4403827 ECH
Lal6g0669 6 4398563 4403827 Lal22g0604 22 4246271 4252310 LSH
Lal6g0669 6 4398563 4403827 Lal18g0273 18 2239828 2245476 LSH