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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal6g0649
ATGGAAGGTCACATGAAGTTTGAAGAAGCTGATCTCATGAGTGACCTAATGCAAGGGAAGGAGCTTACAAAGCAGCTACATAATCATATGTTCTTATCATCATCATCTCATGAAACCAAAGAAGTTTTACTTGAGAAAATACTTTTGTCCTATGAGAAAGCACTCACCAAACTGAAGTGGGAGGCTAATGTAGGAGATAGAGAAACTAAGATCATCAATGGCAACATGATGGATTATTCCCCTTGTTCTTTTACAAATGAGAATCCAAAAAGTGAGGTTTTGGACCAAGAGATTAAGCACAAAAGTGTCTCCAAGAGAAGAAAGATCATTGACATTTGGAAAAAACAAGTGAAGGTGTGTTCAGGAGAAGTGATTGAAGAGTCTCTGGATGATGGCCATAGCTGGAGAAAATATGGACAGAAGGATATCCTTGGAGCAAACTTTCCTAGAGGATATTACAGATGTACACATAAACATGCACAAGGGTGTCTAGTCACAAAGCAAGTGCAAAAATCAGATAAAGACCCAACAACATATGAGATAACCTACAAAGGAAGGCACACATGCATCCAAGCTAATCATGCAAACAAGGCATTCCCATCAAGATCTAAGATTTGCTTGGGAGAACATAAACACCACAACCACCAAAAGAATGAAGCACAAGAAAAGAAAATAGAACAACCACCCCATGAGACAATTTTCTCTTTTAGTTCAGAGCTTGAAGTTAAATTAGAAGACTTGGAAACCAAGGAAAATATCTTCCCATCATTCTGTTTTCCTTCTCCATCAATAGGGTCAGAAAATGAGGACAACAACATGATTGAAAACCCTTTCATGGAATGTTTTTCTCCTACATTCTTATCACATGCCACTTCAGAATCAAACATTTTCTGTTTGTCACCATGCCACTATGGAAGCAATGGACTAGGCCTAAGTGTGCAAACATCAGAATCTATTATCACTGATGTAGTGTCAGCCACAACTTCAATCACCAATTCTCCAATAGTAAACTTGGATGAGTTGAACCTCTTCCTTGATAATGTGGATTTTGACACTTTTCCTATATACCCATGA
1074
0.3808
MEGHMKFEEADLMSDLMQGKELTKQLHNHMFLSSSSHETKEVLLEKILLSYEKALTKLKWEANVGDRETKIINGNMMDYSPCSFTNENPKSEVLDQEIKHKSVSKRRKIIDIWKKQVKVCSGEVIEESLDDGHSWRKYGQKDILGANFPRGYYRCTHKHAQGCLVTKQVQKSDKDPTTYEITYKGRHTCIQANHANKAFPSRSKICLGEHKHHNHQKNEAQEKKIEQPPHETIFSFSSELEVKLEDLETKENIFPSFCFPSPSIGSENEDNNMIENPFMECFSPTFLSHATSESNIFCLSPCHYGSNGLGLSVQTSESIITDVVSATTSITNSPIVNLDELNLFLDNVDFDTFPIYP
357
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal6g0649
357
SUPERFAMILY
WRKY DNA-binding domain
128
189
IPR036576
GO:0003700|GO:0006355|GO:0043565
Lal6g0649
357
SMART
WRKY_cls
129
191
IPR003657
GO:0003700|GO:0006355|GO:0043565
Lal6g0649
357
ProSiteProfiles
WRKY domain profile.
124
187
IPR003657
GO:0003700|GO:0006355|GO:0043565
Lal6g0649
357
Gene3D
WRKY domain
113
184
IPR036576
GO:0003700|GO:0006355|GO:0043565
Lal6g0649
357
PANTHER
WRKY TRANSCRIPTION FACTOR 41-RELATED
1
352
-
-
Lal6g0649
357
Pfam
WRKY DNA -binding domain
130
189
IPR003657
GO:0003700|GO:0006355|GO:0043565
Lal6g0649
357
PANTHER
WRKY TRANSCRIPTION FACTOR 21-RELATED
1
352
IPR044810
GO:0003700
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal6g0649
Lal-Chr6
4239604
4242756
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal6g0649
5
200
WRKY Transcription Factor Family
AT5G24110
40.306
1.75e-40
142
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
WRKY
Lal6g0649
WRKY
1.5e-25
CL0274
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal6g0649
-
-
aprc:113849885
454.521
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lal6g0649
6
4239604
4242756
Lal4g0469
4
3303151
3305538
ECH
Lal6g0649
6
4239604
4242756
Lal6g0649
6
4239604
4242756
ECH
Lal16g1158
16
7911236
7914946
Lal6g0649
6
4239604
4242756
ECH
Lal6g0649
6
4239604
4242756
Lal22g0586
22
4068719
4072127
LSH
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