Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0648 ATGGAGACTCTCAATGCTGCTTCTTTAACCCCTTTATCTGTTTTTTCTGATAGAAGAAAAGAACCCAGAAAACTCTCATCACTCCCCACAATTTCTGCATGCAAAGTTTCAATCTTTTCTACTTCTACCAACAACAAGAAACAGACACTGAAAGAGTGTTTAAGTGGGGGTGGGTTTGCAAAAGCTCTAACTTATGAAGAAGCTTTAGAGCAATCTGTGACTACTAGTTCTGGTGACTTTGATGCAAATGGCGTGGTAGATAGTGTTATCAGTTTTGCAACAGAGAACCCTGCAGTTCTTGCAGGAGGTGTTGCTATTTTGGCACTGCCACTTGTTTTTTCTCAGGTTCTGAACAAGCCTAAGCCATGGGGTGTTGAATCTGCCAAGAATGCATATGCAAGACTAGGTGCTGATGAGAATGCTCAATTGCTTGATATAAGAGCATTAGCTGAGATTAGAAAAGTTGGCACTCCTGATGTTGGGGTTTTGAAGAAGAAATCAGTGTCTATAGGTTATAAGAGTGATAATAAGATAGGGTTTCTTAAGAAGCTTTCACTCAAATTCCAGGAGCCAGAGAATACCACATTGTTTATTCTGGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTGGTCACTGCTAATGGATTTAAAGCTGCATATGCAATTAAGGATGGTGCTGAAGGACCACGAGGATGGACGAATAGCGGTCTTCCTTGGACAGCACCAGCTAAAGGATTGAGTTTGGATTTTGGCAGTCTGACAGAAGCAATCTCGGATTCAATAGGAGACACCTCCGATGGCTTGGCTGTTGTTCTTGGGATTGCCGCAGCTACTGGATTGGGTTTATTAGCTTTTACTGAGATAGAAGCAATTCTCGAAGTTGTTGGATCCGCTGCACTTGTTCAGTTTGCAAGCAAGAAGCTTCTATTTGCTGAAGACCGAAAGCAAACACTACAACAAGTTGATGAGTTCTTGAACACTAAGGTTGCTCCTAAAGAGCTTGTTGATGAAATAAAGCAAATCGGAAAGGCTCTTCTACCAGCCTCCACCAATAGTAAGGCCCTTTCTTCACCAACAGGAAACAGTCCAGACCTTGCTACAGTTGATAGTGTTCAGAATACGGAAGCTACTCCTGTTACTGTCTCTGAATCCAAACTAGATGCATTACCAGAACCAGCTCCTGAAACAGAAAAAAGTCCAGACCTTGTTACAGCTGATAGCACTGTTCAGAAAGCGGAAGCTACCCCGGATACTTTCTCTAAACCCATAATAGACGGAGTTGCAGAATCTGTTCCTGAGATAAACTCGGTGCCCAAAGCGGAAGCTAAGGCTGATTCACTTCCCGTGCAGTCAAAGCCACTTTCACCATACCCTTATTATCCAGATTTCAAGCCTCCAACATCCCCTACACCTTCACAGTCCTGGAAATATTGA 1440 0.4285 METLNAASLTPLSVFSDRRKEPRKLSSLPTISACKVSIFSTSTNNKKQTLKECLSGGGFAKALTYEEALEQSVTTSSGDFDANGVVDSVISFATENPAVLAGGVAILALPLVFSQVLNKPKPWGVESAKNAYARLGADENAQLLDIRALAEIRKVGTPDVGVLKKKSVSIGYKSDNKIGFLKKLSLKFQEPENTTLFILDKFDGNSELVAELVTANGFKAAYAIKDGAEGPRGWTNSGLPWTAPAKGLSLDFGSLTEAISDSIGDTSDGLAVVLGIAAATGLGLLAFTEIEAILEVVGSAALVQFASKKLLFAEDRKQTLQQVDEFLNTKVAPKELVDEIKQIGKALLPASTNSKALSSPTGNSPDLATVDSVQNTEATPVTVSESKLDALPEPAPETEKSPDLVTADSTVQKAEATPDTFSKPIIDGVAESVPEINSVPKAEAKADSLPVQSKPLSPYPYYPDFKPPTSPTPSQSWKY 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0648 479 Gene3D - 123 252 IPR036873 -
Lal6g0648 479 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 476 IPR044240 -
Lal6g0648 479 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 476 - -
Lal6g0648 479 MobiDBLite consensus disorder prediction 456 470 - -
Lal6g0648 479 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 122 242 IPR036873 -
Lal6g0648 479 MobiDBLite consensus disorder prediction 441 479 - -
Lal6g0648 479 MobiDBLite consensus disorder prediction 377 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0648 Lal-Chr6 4233250 4237816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0648 1 466 Sulfurtransferasese or Rhodanese AT4G01050 55.274 3.59e-149 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0648 K17525 - gmx:100810796 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0648 6 4233250 4237816 Lal6g0648 6 4233250 4237816 ECH
Lal6g0648 6 4233250 4237816 Lal22g0584 22 4055802 4059785 LSH