Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0624 ATGCAATATAACCTCCTTTATGCTAAACTCTCCCTCTATTTAAATTCCCTCCCTTCTATTGAAGATTCTGATTGCATCAACCTTGTTACTGGTACCAACCAAAACGACATCGTTCTCTCCCTCCACGCAAATCAAACCATCCACGATTCTTTTCTCGGAGCTACCTTATTCTGGCTCAGCGAACAAAATGAATTGGACCGGACCGGTTCATTTGTTCTCAAAATCAGAAAAGCCGATAAACGGCGACTTCTCCGCCCTTATCTCAACCACATCCACGCCATCGTCGACGAGATAGAGAATCAAAGAAAACGCGACTTGCGGCTATTCATCACAGACGGCAATTCTGCTGGGAAGTCACGGTGGAGATCAACTCCGTTCACGCATCCTTCCACGTTTGAGACTATAGCAATGGAATCTGATCTCAAGGACAAGATCAAATCGGACCTGGAATCGTTCCTTAAGGCGAAGCAATACTACCGGAGAATTGGCCGTGTCTGGAAACGGAGCTTCTTATTGTACGGTCCCTCCGGTACTGGAAAATCAAGCTTCGTCGCGGCCATGGCGAATTTCCTCTCATACGACGTGTACGACGTGGATCTCTCAAAAGTTAAAGGCGATTCAGATCTGAAGCTTCTCCTTGTCGAGACGACACCGACGTCAATCATCGTGGTGGAAGATTTAGATCGGTTCCTTGAGGAGAAATCAAAATTAACGTCGTCGTTTAGCGTATCAGGGATTCAGAACTTTATGGATGGGATTTTAAGCACATGTTGCGGAGAAGAGAGAGTGATGGTGTTTACGATGAGTAACAAAGAACAAATCGACCCGATTCTGCTTCGTCCGGGTCGGGTCGACGTTCATATTCATTTTCCGGTGTGTGATTTCTCAGCGTTTAAATCGCTAGCGAGTAATTACCTTGGTGTAAAGGAGCATAAGCTGTTCCCTCAGGTAGAAGATATTTTCCGGCAAGGAGCGAGTCTGAGTCACTCGGAAATCGGTGAGTTGATGATCGCGAATCGGGACTCGCCTACTCGGGCCATTAGATCGGTAATCGGGGCGCTGAAAACGGACGGTGATGGGAGGGGGTATGAGGAGCTGATCCAACGGCAGATACGGGATGATGACGTGGTTTTACAGCAGGAAAGGTTCAATGCGGTTAAGGATTTGCGGAGAATATACGGTTTGTTTAGGAAGAAGAGTAGTAGAAGATCTCAAGCGTCCATTTCACCAATGCCATCATAG 1242 0.4686 MQYNLLYAKLSLYLNSLPSIEDSDCINLVTGTNQNDIVLSLHANQTIHDSFLGATLFWLSEQNELDRTGSFVLKIRKADKRRLLRPYLNHIHAIVDEIENQRKRDLRLFITDGNSAGKSRWRSTPFTHPSTFETIAMESDLKDKIKSDLESFLKAKQYYRRIGRVWKRSFLLYGPSGTGKSSFVAAMANFLSYDVYDVDLSKVKGDSDLKLLLVETTPTSIIVVEDLDRFLEEKSKLTSSFSVSGIQNFMDGILSTCCGEERVMVFTMSNKEQIDPILLRPGRVDVHIHFPVCDFSAFKSLASNYLGVKEHKLFPQVEDIFRQGASLSHSEIGELMIANRDSPTRAIRSVIGALKTDGDGRGYEELIQRQIRDDDVVLQQERFNAVKDLRRIYGLFRKKSSRRSQASISPMPS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0624 413 SMART AAA_5 166 294 IPR003593 -
Lal6g0624 413 PANTHER BNAC04G00800D PROTEIN 1 378 - -
Lal6g0624 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 351 IPR027417 -
Lal6g0624 413 Gene3D - 122 292 IPR027417 -
Lal6g0624 413 PANTHER BCS1 AAA-TYPE ATPASE 1 378 - -
Lal6g0624 413 CDD AAA 167 291 - -
Lal6g0624 413 Pfam ATPase family associated with various cellular activities (AAA) 171 291 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0624 Lal-Chr6 4038034 4039275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0624 168 292 Calmodulin-binding Proteins AT3G56690 30.935 7.85e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0624 6 4038034 4039275 Lal6g0624 6 4038034 4039275 ECH
Lal3g1538 3 21086152 21087537 Lal6g0624 6 4038034 4039275 PCT
Lal6g0624 6 4038034 4039275 Lal3g1538 3 21086152 21087537 PCT