Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0618 ATGATAACCCACATTGATAACCTTTGGGTCCTTGCCTTAGCCTCCAAATGCACACAACAAAACATTGCATACTTGCTTTTAATCATGGCCACTCTCTGGCTAACCATGGCTCTGTTTCACTGGTCTCACCCAGGTGGTCCTGCTTGGGGAAAGTACTACTCCACCTGGAGAAAATCCAAATCATCTTCTGAGTCTGACCATAAAAGTAACATGATTATTCCTGGTCCCAAAGGGTACCCTTTAATCGGAAGCTTTAGTCTCATGACTTCCCTCGCTCACCACCATATTGCAGCAGCTGCTAAAGCCTTCAACGCTACGAGACTCATGGCTTTCAGCCTTGGTGAAACACGTGTTATAGTCACGTGCCACCCTGATGTAGCTAAAGAGATTCTCAATAGCTCAGTTTTTGCTGATCGCCCTATTAAAGAATCAGCTTATAGTCTCATGTTCAATCGCGCTATCGGTTTCGCTCCCTATGGTGTTTACTGGCGAACTCTAAGGAGAATCGCTGCCACACATCTTTTTTGTCCTAAGCAAATTAAGGCCTCGGAGACTCAGAGAAATGAAATCGCCACCCAAATGATCGGCTTCTTTAAAATCCGCCAAACTGAAGGTGATTTTGTAACTGTGAGACACGTTCTCAAGAGAGCTTCGTTGAATAACATGATGTGGTCAGTGTTTGGACAAAGGTACGATGCAAACAGTGGAATGGAAGAGGAGTTAAGCGGTTTAGTGGAGCAAGGGTATGACCTTTTAGGTACCCTTAATTGGGGTGACCACCTTCCTTTGCTCAAAGAGTTTGACTTACAAAAAATCCGGTTCACCTGCTCCAAACTTGTTCCTAAAGTGAACCGGTTTGTCGGTTCAATCATCGCAGAACATCGAACCCACACAACAGAATCCAACCGGGATTTCGTTCATGTCTTGCTCTCTCTCAATGGTCCAGATAAACTGTCTGATCCCGACATGATTGCTGTACTTTGGGAAATGATATTTCGGGGGACCGACACGGTAGCGGTATTGATTGAATGGATATTAGCAAGAATGGTGCTACATCCCGAGGTGCAGCATAAGGTTCAAGAGGAGCTGGACATGGTTGTGGGTTGTGTTTCACGCCCTTTGACGGAGGAGGATATGGCGGCGCTGGTGTATCTTCCGGCGGTGGTGAAGGAGGTCCTGAGGCTGCATCCACCGGGCCCGCTACTCTCGTGGTCCCGCTTGGCCATAACAGACACATCCATTGATGGGTATCATGTGCCTGCGGGGTCTACAGCTATGGTTAATATGTGGGCCATATCAAGGGACCCAGATGTGTGGAAGGACCCACTTGAATTTATGCCTGAGAGGTTCGTGGCTGGTGAGGGAGAGCCTGAGTTTTCTGTTCTTGGGTCAGATCTAAGGTTGGCTCCGTTTGGTTCTGGTAGAAGAACTTGCCCTGGGAAGAGTTTGGGTTTGGCTACTGTGAGCTTTTGGGTTACTAGGCTTTTGCATGAGTTTGAATTTCTACCGTGTGATGATGAGATGAATGGTGTTGATCTCAAGGAGGTGCTTAGACTCTCTTGTGAAATGGCTAACCCACTCACTGTTATGGTTCGCCCCAGGCGTGGGTTATGA 1614 0.4734 MITHIDNLWVLALASKCTQQNIAYLLLIMATLWLTMALFHWSHPGGPAWGKYYSTWRKSKSSSESDHKSNMIIPGPKGYPLIGSFSLMTSLAHHHIAAAAKAFNATRLMAFSLGETRVIVTCHPDVAKEILNSSVFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASETQRNEIATQMIGFFKIRQTEGDFVTVRHVLKRASLNNMMWSVFGQRYDANSGMEEELSGLVEQGYDLLGTLNWGDHLPLLKEFDLQKIRFTCSKLVPKVNRFVGSIIAEHRTHTTESNRDFVHVLLSLNGPDKLSDPDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPEVQHKVQEELDMVVGCVSRPLTEEDMAALVYLPAVVKEVLRLHPPGPLLSWSRLAITDTSIDGYHVPAGSTAMVNMWAISRDPDVWKDPLEFMPERFVAGEGEPEFSVLGSDLRLAPFGSGRRTCPGKSLGLATVSFWVTRLLHEFEFLPCDDEMNGVDLKEVLRLSCEMANPLTVMVRPRRGL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0618 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Lal6g0618 537 SUPERFAMILY Cytochrome P450 73 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 Pfam Cytochrome P450 74 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 Gene3D Cytochrome P450 58 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS E-class P450 group I signature 342 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS E-class P450 group I signature 428 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PANTHER CYTOCHROME P450 78A6 1 536 - -
Lal6g0618 537 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PRINTS P450 superfamily signature 478 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0618 537 PANTHER CYTOCHROME P450 78A7-RELATED 1 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0618 Lal-Chr6 4001548 4003732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0618 1 535 Cytochrome P450 AT2G46660 67.532 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0618 K20619 - gmx:100798388 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0618 6 4001548 4003732 Lal6g0618 6 4001548 4003732 ECH
Lal6g0618 6 4001548 4003732 Lal22g0560 22 3826329 3830419 LSH
Lal6g0618 6 4001548 4003732 Lal18g1050 18 13499584 13501833 LSH