Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0613 ATGCATCAGACACCGCAAATGATTCCTGTTATGCCTTCATTTCCACCTACAAACATAACCACCGAGCAGATTCAAAAGTATCTTGATGAGAACAAGAAGCTAATTCTGGCAATATTGGACAATCAAAATCTTGGAAAACTTGCTGAGTGTGCCCAGTATCAAGCTCAGCTTCAAAAAAACTTGATGTATTTAGCAGCAATTGCTGATGCCCAACCACAAACACCAACCATGCCTCCACAGATGACGCCGCACCCCGCGATGCAACAAGGTTTCTATATGCAACATCCTCAGGCCGCAGCAATGACTCAGCAGCCAGGACTTTTCCCCCAAAAGATGCCGTTGCAATTCGGCAGTCCACATCAAATGCAAGAGCAGCAACAGCAGCTACACCACCAACAGCAGCAGGCCATCCAAGGACAAATGGGACTCAGACCTGGAGGCCCGAACACTGGCATGCATTCCATGCATAGCGAGGCTACTCTTGGAGGTAGCAGCGGTGGTGGTCCACCTTCAGCCCCTGGTCCAAACGATACACGTGGCGGAAGCAAACAAGTTGCTTCTGACTCAGGGGCAGCTGGTGGAAATGACCAAGGCAGCTCAGCTGCCGCGCATAACAGTGGAGACGGTAAATCATCTTATCTGAAAGGATCAGAAGAGGCAAAGTGA 666 0.4955 MHQTPQMIPVMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPTMPPQMTPHPAMQQGFYMQHPQAAAMTQQPGLFPQKMPLQFGSPHQMQEQQQQLHHQQQQAIQGQMGLRPGGPNTGMHSMHSEATLGGSSGGGPPSAPGPNDTRGGSKQVASDSGAAGGNDQGSSAAAHNSGDGKSSYLKGSEEAK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0613 221 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 1 165 IPR044779 GO:0003713
Lal6g0613 221 MobiDBLite consensus disorder prediction 108 221 - -
Lal6g0613 221 PANTHER BNAA09G51550D PROTEIN 1 165 - -
Lal6g0613 221 MobiDBLite consensus disorder prediction 177 212 - -
Lal6g0613 221 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
Lal6g0613 221 MobiDBLite consensus disorder prediction 116 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0613 Lal-Chr6 3949360 3953998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0613 - - vun:114167142 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0613 6 3949360 3953998 Lal6g0613 6 3949360 3953998 ECH
Lal6g0613 6 3949360 3953998 Lal22g0555 22 3769700 3773921 LSH
Lal6g0613 6 3949360 3953998 Lal18g1055 18 13576972 13586443 LSH