Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0612 ATGACCACCAAGGCACCGAAACCTCGTACCCGTGTAGGGAAGTACGAGCTGGGAAAAACCATTGGCGAAGGAAGCTTTGCAAAGGTTAAGTTAGCCAGGAACGTTGATACTCGCGACTATGTTGCTATCAAAACCCTCGACCGTGACCATGTCCTCCGCCATAACATGATGGAACAGGCACGTAGTTACTCATATATGATATTGATTTATCTGAAGAAAGAAATTTCAGCGATGAAGCTCATCAATCATCCAAACGTTGTGATGGCAAGCAAAACAAAGATCTACATTGTACTGGAGTTGGTTAAGGGAGGAGAACTATTTGACAAAATTTCCAATAGTGGCAAACTAAAAGAGGATGAAGCAAGAACTTATTTCCAACAACTAATCAATGCAGTTGATTACTGCCATAGTAGAGGCGTGTATCACCGAGATTTGAAGCCTGAGAATCTTCTTCTGGACACAAATGGTGTTCTTAAAGTTTCAGATTTTGGATTGAGTACTTACGCGCATCAAGAGAATGAACTCCTCCGCACTGCTTGTGGAACACCAAATTATGTTGCTCCTGAGGTGCTTAGGGATAGAGGTTATGTTGGTTCTGCATCTGATATCTGGTCATGTGGAGTCATTCTCTTTGTACTAATGGCTGGGTACTTGCCTTTTGATGAACCAAATCATGCGGCGTTGTTCCGGAAAATTAGCAGGGCTGATTTCAGTTGTCCATCTTGGTTTGCGCCTGAGTCAAAGAAACTGCTGAAACGTATTCTTGACCCAGACCCTCTTACAAGGATAAAAATAGAAGAACTCTTAGAGGATGAATGGTTCAAGAAAGGATACAAGCCAGCATCTTTTACAGAGGAAGAGGGTGTGAATGTTGATGATGTAGCAGCTGCTTTCAATGATTCTAAGGAAAATCTTGTGACAGAGAGAAAAGGGAAACCAGTCTCAATGAATGCTTTCGAGCTCATTTCTAAGTCGCAAAGCTTCAATCTTGACAGTTTGTTTGAGAAGCAGACAGGGATTGTAAAGCGAGAAACACATTTTACTTCACAGCGTCCTGCAAATGAAATTATGTCTAAAATTGAGGAAGCTGCCAAACCTCTGGGCTTCAATGTTCACAAGCGAGATTATAAGATTCAAATCATGCAGATGAAGCTGCAAGGTGATAAGAGCGGAAGGAAGGGTCACCTTTCAGTGGCTACTGAGTTTTACAAGAACTTCTCATCAGGGTTGCAAGACATAGTGTGGCACACTGAAGAGAAAAAATGA 1266 0.4202 MTTKAPKPRTRVGKYELGKTIGEGSFAKVKLARNVDTRDYVAIKTLDRDHVLRHNMMEQARSYSYMILIYLKKEISAMKLINHPNVVMASKTKIYIVLELVKGGELFDKISNSGKLKEDEARTYFQQLINAVDYCHSRGVYHRDLKPENLLLDTNGVLKVSDFGLSTYAHQENELLRTACGTPNYVAPEVLRDRGYVGSASDIWSCGVILFVLMAGYLPFDEPNHAALFRKISRADFSCPSWFAPESKKLLKRILDPDPLTRIKIEELLEDEWFKKGYKPASFTEEEGVNVDDVAAAFNDSKENLVTERKGKPVSMNAFELISKSQSFNLDSLFEKQTGIVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRDYKIQIMQMKLQGDKSGRKGHLSVATEFYKNFSSGLQDIVWHTEEKK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0612 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lal6g0612 421 Gene3D Transferase(Phosphotransferase) domain 1 101 300 - -
Lal6g0612 421 ProSiteProfiles Protein kinase domain profile. 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0612 421 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lal6g0612 421 SUPERFAMILY Protein kinase-like (PK-like) 12 287 IPR011009 -
Lal6g0612 421 Pfam Protein kinase domain 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0612 421 Gene3D Kinase associated domain 1, KA1 311 416 - -
Lal6g0612 421 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 6 403 - -
Lal6g0612 421 CDD CIPK_C 317 404 - -
Lal6g0612 421 PANTHER - 6 403 - -
Lal6g0612 421 Gene3D Phosphorylase Kinase; domain 1 4 100 - -
Lal6g0612 421 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Lal6g0612 421 Pfam NAF domain 313 373 IPR004041 GO:0007165
Lal6g0612 421 SMART serkin_6 15 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0612 Lal-Chr6 3939645 3943711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0612 6 418 CBL-interacting serine-threonine protein kinases AT1G01140 65.111 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal6g0612 Pkinase 2.1e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0612 - - lja:Lj3g3v2483040.1 684.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0612 6 3939645 3943711 Lal6g0612 6 3939645 3943711 ECH
Lal6g0612 6 3939645 3943711 Lal22g0554 22 3757319 3764626 LSH