Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0605 ATGGAAAAAGTAGAACAAACCAATGGTGCACTTTCACATATTGATCCTAAAGACAAAAAACTTAACCACAAAATAACCATGGTGGAAGAAAAAAGCTTCACCTATGCTATGCAACTGGTAAACTCTAGTGTGCTTTCAATGGCCATGCAATCAGTCATTGAGCTTGGTGTTTTTGACATCATAAACAAAGCAGGTGTAGGTGCCAAGCTCTCTGCTAAGGACATTGCTGAAGAGTTTTCATGCAAGAACCCTGATGCAGCAACAATGCTAGACCGTATTCTAAGGCTCCTGGCAAATCATTCCATTGTTGATTGTACTGTGGTTGATGATGAAAATGGTCCTCCTCCACATTTGAAGAGGCTCTATAGCATGGCCCCTGTGACCAAATACTTTGTTTGCAATGGTGGTGTTGGGTCATTGGGACCTTTGATGGTGTTGACTCAGGACAAGGCCGTCCTTGAAAGTTGGTACCAACTAAAGGATGCAATTTTGGAAGGAGGTATTCCATTCAACAGGGTTCATGGCAAACACGTCTTTCAGTATGCCAATTTGAACTTAAGCTTCAATCAGCTTTTCAATATAGCAATGACCAATCGTGCCACTTTACTTATGAATAAGATTCTTGAATCTTACAACGGGTTTGAGCATATCAATAAGCTTATTGATGTTGGTGGTGGCCTTGGTGTCACCCTTAACATAATCATTTCTAAATACCCTCACATTCAGGGTATCAATTTTGACTTGCCTCAGGTCATAGAACTTGCCTCTCCCTATCCAGGTGTTGAACATGTGGGAGGAAATATGTTCGAAAATGTACCACAAGGAGATGCTATTTTGATGAAGTGTGTACTTCATGACTGGAGTGATGAAGACTGTTTGAAAGTGTTGAAGAAGTGCTATGCAGCCATTCCTGATAATGGTAAAGTGATAGTTGTGGAAGGAATTCTTCCATTTGAACCTGAAAAAACAGATGCAGTGAAGAGCATTTCCCAATTTGATGTTCTCATGATGACAACAAACCCAGGAGGGAAGGAGAGAAGTGAACATGAGTTCATGACAATAGCAAAAGGTGCTGGATTCAGTGGCATTACATATAAATGCTTTGTCTATGATGTCTGGGTTATGGAATTCTTCAAGTAG 1140 0.4053 MEKVEQTNGALSHIDPKDKKLNHKITMVEEKSFTYAMQLVNSSVLSMAMQSVIELGVFDIINKAGVGAKLSAKDIAEEFSCKNPDAATMLDRILRLLANHSIVDCTVVDDENGPPPHLKRLYSMAPVTKYFVCNGGVGSLGPLMVLTQDKAVLESWYQLKDAILEGGIPFNRVHGKHVFQYANLNLSFNQLFNIAMTNRATLLMNKILESYNGFEHINKLIDVGGGLGVTLNIIISKYPHIQGINFDLPQVIELASPYPGVEHVGGNMFENVPQGDAILMKCVLHDWSDEDCLKVLKKCYAAIPDNGKVIVVEGILPFEPEKTDAVKSISQFDVLMMTTNPGGKERSEHEFMTIAKGAGFSGITYKCFVYDVWVMEFFK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0605 379 PIRSF O-mtase 14 379 IPR016461 GO:0008168
Lal6g0605 379 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 37 379 IPR016461 GO:0008168
Lal6g0605 379 PANTHER O-METHYLTRANSFERASE 17 379 IPR016461 GO:0008168
Lal6g0605 379 SUPERFAMILY "Winged helix" DNA-binding domain 30 134 IPR036390 -
Lal6g0605 379 Gene3D Vaccinia Virus protein VP39 134 379 IPR029063 -
Lal6g0605 379 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 17 379 - -
Lal6g0605 379 Gene3D - 14 131 IPR036388 -
Lal6g0605 379 Pfam Dimerisation domain 47 98 IPR012967 GO:0046983
Lal6g0605 379 Pfam O-methyltransferase domain 156 361 IPR001077 GO:0008171
Lal6g0605 379 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 377 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0605 Lal-Chr6 3888361 3890941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0605 25 379 Monolignol Biosynthesis Gene Families AT5G54160 47.042 1.48e-122 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0605 K13066 - gmx:100788873 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0605 6 3888361 3890941 Lal6g0605 6 3888361 3890941 ECH
Lal6g0605 6 3888361 3890941 Lal22g0543 22 3644569 3648010 LSH