Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0604 ATGACGGCTTTACTGTTCACTGTGCTCCATGTGCGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACAGATGAGGAACACAATAGGTTTCTACAAGCTTTAAAGCTTTATGGACGAGCATGGCATCGCATAGAAGAACATATCGGAACAAAGACTGCCGTGCAAATCAGGAGCCATGCACAAAAGTTCTTTACAAAGTTGGAGAAAGAGGCCCTTGTTAAGGGTTTACCAATTGGACAAGCTCTTGACATAGACATCCCCCCTCCACGGCCCAAAAGAAAGCCAAGCAATCCTTATCCTTGGAAGACCAATGTGGGTGCCCCAACATATCAGGGTGGAGCAAAGGATGGAAAACTCGTTTCAGTTGAATCTTCCTGTGTTAAACAAACATTGGACTTTGAAAAAGTGCCATTTCCAGAGAAATATAATGATGATGAAAGGCAAACACATGTAAAGGATAATAAGGATGAGAACTGCTCAAAAGTATTTCCTGTTCTCCAGGAGGCACCCTGTTCATCTGTATATTCAGGAAACAAGAGCTCAATATCAATGTCAGCACCACTGAGAAATTCATGTGCATTAAGGGAGATTATATCTTCAATGAAAGAGGCAATATCGCAAGATGAAACAAATAAATCTCTTGACGCTATTGAACCTGAAAATCGGAAGCTGGAGGTAGATGATGGGAAACAGATTAATGGTACCAGTAAAGAGTCCCAGTTGGAGAATTGTGATGCTTCACAAGTGAAATTGGTTCAAAGTGAGAAAACAGATGGTCTTAATTGCACTTTAACTATAGATAGAATGCAAGGAAATCAGAGTTATCCTAAACATGTTACTGTTCATGCTGTTGATGGGAACCTTGGAACAAGTACTCAAAACCCATCCCTAGATATGTTGTTTCAGGATTCCATGTTTCAACCAATTGGAAAGGTTAACCGGCAGCCTAATCTTTTCACAAATTCAGTTGCATCAAACATAAGCGAAAATCAGAATAACACAGCACCATCTTCTATTCATCAACCAGATTTTCCTTATCCTCCCTTTGCACAATATAACCGAGATGATTGCCAACCATTTCTTCATCTGTCCACCACATTTTCAAGTCTAACTGTCTCTACCTTGCTGCAAAACCTTGCAGCCCATGCCGCAGCAAGTTTGGCTGCTACTTTTTGGCCCTATGAAAATGCAGAAACTTCAGCAAATTCTCCTGCATGCTCTCAAGGAAGTTTTCCATCCAGACAAATTGGCTCCCCTCCCAATGTAGAGGCTATTGCAGCTGCTACTGTAGCTGCAGCAATTGCATGGTGGGCTGCCCATGGATTGCTTCCAGTATGTGCTCCTCTTTATACTGCTTTTGACTCTCCTACAGCATCAACGACTGCAGTTCCACTTCCATCAATGAATATTGATGAAGCACCCGCACCAAACACAGAGCTAGAACAGGGTAATCTCCAAAACCCTCCTTTGCAAGATCAAATACTGGATCCAAAACACTCAGAAGCTCAACAAGCTCAACATTCAGCTTCTAAGCCATTGACTGTTATTTCATTAGACTCTGAAGAGAATGGAGTTGGCAGTTTAAATACTTCATTAAAGGCTACTGATCATGTGAAGAACACAACAATTTCTGAGAACTTTGATTCTGACAAAACAAAGAGCAGAAAACAGGTTGATCGTTCCTCATGTGGTTCCAATACAACCTCTAGCAGTGATGTCGAGACTGATGCATTAGATAAGAATGGGAAAGGGAATGAACAGCCTGAAGCACCTGAACCTGATCCTAACCATTTAATCACAGAGTCTAGTAATCGTCGTATTAGAAGCGTTGTCAACCTTACTGATCCTTGGAAGGAGGTGTCTGAAGAGGGGCGATTGGCCTTCCGGGCTCTTTTCTCCAGAGAGGTGTTGCCGCAGAGCTTCTCACTGCATGATTTAAAAAATAAGGATCATCAAATGGATAACATTAAGGATAACAAGCAAAACGTAGATGGCAAGAATGAAGACCTTGACAGCAAGAAATGCTGTTCTGATTGTGAAGGAATGAAGAAAAATCTGCCATTTCTAGAAAATGAGGAGAGGCTGCTAAGCATGGGGCTTGGACAAGGAAATCTGAAGACTTGCCGAACAGGCTTCAAACCATACAAAAGATGTTCAGTGGATGTCAGGGAAAACAATGTTGGAACGAGCAACAACCAAGGTGAAGAGAAGGGTTCTAAGAGAATACGCTTGGAAGGAGAAGCTTCAATTTGA 2259 0.4174 MTALLFTVLHVRKPYTITKQRERWTDEEHNRFLQALKLYGRAWHRIEEHIGTKTAVQIRSHAQKFFTKLEKEALVKGLPIGQALDIDIPPPRPKRKPSNPYPWKTNVGAPTYQGGAKDGKLVSVESSCVKQTLDFEKVPFPEKYNDDERQTHVKDNKDENCSKVFPVLQEAPCSSVYSGNKSSISMSAPLRNSCALREIISSMKEAISQDETNKSLDAIEPENRKLEVDDGKQINGTSKESQLENCDASQVKLVQSEKTDGLNCTLTIDRMQGNQSYPKHVTVHAVDGNLGTSTQNPSLDMLFQDSMFQPIGKVNRQPNLFTNSVASNISENQNNTAPSSIHQPDFPYPPFAQYNRDDCQPFLHLSTTFSSLTVSTLLQNLAAHAAASLAATFWPYENAETSANSPACSQGSFPSRQIGSPPNVEAIAAATVAAAIAWWAAHGLLPVCAPLYTAFDSPTASTTAVPLPSMNIDEAPAPNTELEQGNLQNPPLQDQILDPKHSEAQQAQHSASKPLTVISLDSEENGVGSLNTSLKATDHVKNTTISENFDSDKTKSRKQVDRSSCGSNTTSSSDVETDALDKNGKGNEQPEAPEPDPNHLITESSNRRIRSVVNLTDPWKEVSEEGRLAFRALFSREVLPQSFSLHDLKNKDHQMDNIKDNKQNVDGKNEDLDSKKCCSDCEGMKKNLPFLENEERLLSMGLGQGNLKTCRTGFKPYKRCSVDVRENNVGTSNNQGEEKGSKRIRLEGEASI 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0604 752 PANTHER SWI/SNF COMPLEX-RELATED 9 734 - -
Lal6g0604 752 ProSiteProfiles Myb-like domain profile. 16 66 IPR001005 -
Lal6g0604 752 ProSiteProfiles SANT domain profile. 19 70 IPR017884 -
Lal6g0604 752 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 68 IPR006447 GO:0003677
Lal6g0604 752 Pfam Myb-like DNA-binding domain 21 64 IPR001005 -
Lal6g0604 752 Gene3D - 23 70 - -
Lal6g0604 752 MobiDBLite consensus disorder prediction 727 752 - -
Lal6g0604 752 MobiDBLite consensus disorder prediction 86 116 - -
Lal6g0604 752 MobiDBLite consensus disorder prediction 466 495 - -
Lal6g0604 752 MobiDBLite consensus disorder prediction 481 495 - -
Lal6g0604 752 SMART sant 20 68 IPR001005 -
Lal6g0604 752 MobiDBLite consensus disorder prediction 561 577 - -
Lal6g0604 752 CDD SANT 23 66 IPR001005 -
Lal6g0604 752 Coils Coil 655 675 - -
Lal6g0604 752 MobiDBLite consensus disorder prediction 548 605 - -
Lal6g0604 752 PANTHER PROTEIN LHY 9 734 - -
Lal6g0604 752 SUPERFAMILY Homeodomain-like 15 71 IPR009057 -
Lal6g0604 752 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 70 IPR017930 -
Lal6g0604 752 MobiDBLite consensus disorder prediction 738 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0604 Lal-Chr6 3876803 3884191 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal6g0604 Myb_DNA-binding 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0604 K12133 - gmx:100271888 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0604 6 3876803 3884191 Lal6g0604 6 3876803 3884191 ECH