Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0603 ATGTTACCCTTTGTTGTTGTTAGTTTTGGTGTACTTGTGTTGTTGCCTTTTTCTTATTCCCTCCAAGTGCAAGGAAAACTAGTACAACCCTCTTTGATTCCAAATTCTTGCAATGAAATATGTGGGAAACTTCATGTTCCTTTTCCATTCTATGTGAACACTTCTTGTGTTTCAATCTCTAGTCTTTTCCACCTCACTTGCTCAAATTCCTCTACCCTTTTAATCAAATTTGGCTCAGAAAGCTTTCCAGTGTTGGAATTCTTCCATGATGGTTTGTTAGTGGACTTTCCTGGCTCATCATTGTGTCGCCAGTACAATGACTTGAACTCATTTGGTAACAATTTTTCAGGAAAAGATCACTTTGGAGTCTCAGTTGACAATGTTATTGGCCTCTATGACTGTGAGGATTCTTCTCTTTGCAAAGCGGATTGCGAAACGGTTGACCTTCCCGGCTGTGATGGAAGCAGTGGTGGCTCCCTTGGTTGCTGTTATCCACTCTCTGACCATAGTATATGGCATGTTGGACAAGGCTTTTCAGTGTTTTCTCAGTTTGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGCCTCAAATTCAGGAAAACGCGGTGTCAAGTTAGAATGGGCTATTCCAAGAAACTCCTCAAAGGAAGTTTGTGCAAGGAATGCAGACATGATAAATGCTACATCAATTGAAGATGGTGTAAGGTGTGTTTGTCAAGATGGATATGATGGTGATGGGTTTACTAATGGATCAGGATGCTTGCAGTCCTGTATAAAAAATGGACAGGAAGCATATGGAAATGACTGCTATATCAAAGGACATGACCAAAGGAAAATAGTTATAATTGCTGGAATCCTTGGTCCAGTTCTTATTGTTGCCTCCTTGGTTGCACTATTTTATCTTCTTAAAAGACCAATAAAACCAGAGATGCTAGATACCGAGCAGGCTTATTATCACAACGTTTCAATTCGTAAAGCTTCTAGAACTCGACTATTCAGCCACCATGAGCTAGAGGAAGCCACCAATGGCTTCGAAGAGAGCCGGAAACTCATGCAAGGTACTAATGGAACAATGTTTGCTGGAGTTCTTGGAGATGGATCACATGTAGCTATACACAAGTTAAAATGTGAGAATGAGAGTGACATGATTCAAGTCCTGGCACAAATTGAGGTTCTATCTGGTGTTGTACATAGGAACATGGCATGCCTTATTGGATGCTGTATTGACTCTGCATACACTCCTCTAGTGGTGTATGAGTATCCTGCAAATGGTACCTTGGAGGAGCATTTACACAAAAGTAAAGGACAAAGATATGGTTTAGATTGGTATAGGAGAGTGTCTATTGCTACAGAAACTGCTTGTGTTGTTGCATTCTTACATTATGAGAACTCTCCTCCCATATTCCATCATAACCTTAAATCTAACTGCATTTTCCTAGACGGTGATTTTTCTGTCAAGATTGCAGGATTTTGCCTACTTAATTCCAATGTTAATCATGATTCTCAGTTGTACAAGAAGCGCGAATGCTTTCGCTTATGCAAAAATGATGTATATGACATGGGAGTGGTGCTTCTTGAGATTATCTCAGGTTCAAATGAATTGGACTCACCAACTTTAGCCTTGCAGAAAATAAAAGATGGAAAGCTAGAAGAAATTGTTGATCCATTTCTTTGTTATCATGAACAACCTTATCATAGGCAAGAGCAAATACTAACAATTGCAGAGCTTTCAACAAGATGCATGCTATTTGGAGCAGATGGAAAGCTTGGAATGATTGATGTTGCAAGGGAGTTAGTACACATAACTAAAGAGAATCTTGATGGAGGAGTTATGAGAGGGCCTTCATTGGAAGAAACATTCTCAAATTCAAGCCTTCTTCAAATGATATCAATGTCTCCTGATTCTATGAATGTTTCTTGA 1926 0.3956 MLPFVVVSFGVLVLLPFSYSLQVQGKLVQPSLIPNSCNEICGKLHVPFPFYVNTSCVSISSLFHLTCSNSSTLLIKFGSESFPVLEFFHDGLLVDFPGSSLCRQYNDLNSFGNNFSGKDHFGVSVDNVIGLYDCEDSSLCKADCETVDLPGCDGSSGGSLGCCYPLSDHSIWHVGQGFSVFSQFGCRGFSSWAVLRASNSGKRGVKLEWAIPRNSSKEVCARNADMINATSIEDGVRCVCQDGYDGDGFTNGSGCLQSCIKNGQEAYGNDCYIKGHDQRKIVIIAGILGPVLIVASLVALFYLLKRPIKPEMLDTEQAYYHNVSIRKASRTRLFSHHELEEATNGFEESRKLMQGTNGTMFAGVLGDGSHVAIHKLKCENESDMIQVLAQIEVLSGVVHRNMACLIGCCIDSAYTPLVVYEYPANGTLEEHLHKSKGQRYGLDWYRRVSIATETACVVAFLHYENSPPIFHHNLKSNCIFLDGDFSVKIAGFCLLNSNVNHDSQLYKKRECFRLCKNDVYDMGVVLLEIISGSNELDSPTLALQKIKDGKLEEIVDPFLCYHEQPYHRQEQILTIAELSTRCMLFGADGKLGMIDVARELVHITKENLDGGVMRGPSLEETFSNSSLLQMISMSPDSMNVS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0603 641 SUPERFAMILY Protein kinase-like (PK-like) 328 600 IPR011009 -
Lal6g0603 641 Pfam Wall-associated receptor kinase galacturonan-binding 37 88 IPR025287 GO:0030247
Lal6g0603 641 Gene3D Phosphorylase Kinase; domain 1 316 422 - -
Lal6g0603 641 Gene3D Transferase(Phosphotransferase) domain 1 424 609 - -
Lal6g0603 641 PANTHER OS10G0351500 PROTEIN 46 636 - -
Lal6g0603 641 Pfam Protein tyrosine and serine/threonine kinase 349 511 IPR001245 GO:0004672|GO:0006468
Lal6g0603 641 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 46 636 IPR045274 GO:0007166
Lal6g0603 641 ProSiteProfiles Protein kinase domain profile. 346 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0603 Lal-Chr6 3871844 3874569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0603 37 603 Receptor kinase-like Gene Family AT2G23450 30.757 1.06e-63 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lal6g0603 PK_Tyr_Ser-Thr 1.6e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0603 - - gmx:100810557 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0603 6 3871844 3874569 Lal6g0603 6 3871844 3874569 ECH