Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0598 ATGGCTTCCGCATGTGCTTCTTCTGCTATTGCAGCTATTGCCATCTCTACCCCAAGGCAATTAAAAACATATGGAACCACATGCAGTTCTCAGAAGAATGGATCAGCCTTGGGAACCACAAAAGCTGGTTTTCTTAGTGGGAGGAAAGTGAGGGTGAACCACTTTACAGCACCAGTTGGAGGGAGATCCAACACTACAGTGTGTGCAGTAGCTGACCCTGACAGGCCTCTATGGTTCCCAGGCAGCACCCCTCCTGCATGGCTTGATGGTAGTCTCCCAGGAGACTTTGGTTTTGATCCTCTTGCATCTGATCCTGAGAGCCTAAGATGGAATGTTCAAGCAGAGTTAGTACACAGCAGATGGGCAATGTTGGGTGCTGCTGGCATCTTCATCCCAGAATTCCTAACAAAGATTGGTATCCTAAACACTCCTTCATGGTACACTGCTGGAGAGCAAGAATACTTCACAGACACAACCACACTCTTCATAGTTGAGCTCATTTTCATTGGCTGGGCTGAGGGTAGAAGGTGGGCTGATATAATCAAGCCAGGGTCTGTCAACACTGACCCTATCTTCCCCAACAACAAGCTCACCGGGACCGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCTCTTGGATGGGGAAGTGGTTCTCCTCAGAAGCTGAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGATTGGCCATGTTGGCTGTGATTGGTGCATGGTTCCAGCATATATACACTGGCACTGGTCCCATAGACAACCTCTTTGCTCATCTTGCAGATCCTGGCCATGCTACTATTTTTTCTGTAAGTTCTACCAAAAGCCTAGGCCTTCATTGCATATATACTTCCACACTAATTTATTATTCTGTAAATGTTCCTGCTTAA 900 0.4722 MASACASSAIAAIAISTPRQLKTYGTTCSSQKNGSALGTTKAGFLSGRKVRVNHFTAPVGGRSNTTVCAVADPDRPLWFPGSTPPAWLDGSLPGDFGFDPLASDPESLRWNVQAELVHSRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADIIKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPQKLKELRTKEIKNGRLAMLAVIGAWFQHIYTGTGPIDNLFAHLADPGHATIFSVSSTKSLGLHCIYTSTLIYYSVNVPA 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0598 299 SUPERFAMILY Chlorophyll a-b binding protein 71 274 - -
Lal6g0598 299 Pfam Chlorophyll A-B binding protein 84 248 IPR022796 -
Lal6g0598 299 Gene3D Chlorophyll a/b binding protein domain 85 268 - -
Lal6g0598 299 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 40 274 IPR001344 GO:0009765|GO:0016020
Lal6g0598 299 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 40 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0598 Lal-Chr6 3835828 3837395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0598 56 278 Chloroplast and Mitochondria Gene Families AT3G61470 86.726 3.83e-144 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0598 K08908 - gmx:100802138 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0598 6 3835828 3837395 Lal18g1069 18 13757022 13758570 LSH