Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0594 ATGGTCACTCTCAAAATATTATCTTTCCTTCTATTATCCTTGTTGGTTGTTCAAGTCTCATCATGTAACCAATTTGATAAAGATTCCCTTTTGGCCTTTTCTGCTAACATATCTGTATCTTCCTCTTACCTTCCACTTAATTGGACTAACTCTCTTGATTGCTGCAGTTGGGAAGGTATTACTTGTGATGTGGATCTTAGAGTAACCAATCTTTCTCTACCCTTTAGAGGTCTAAATGGATTCATTTCTCCTTCTATTACAAATCTTACTTCTCTCACACACCTTAATCTTTCCAATAACTGGTTGTCTGGTAATCTAGATAACCATTTTTTCTCACTGCTTAATCACTTATTGGTTCTTGATTTAAGCTACAATCATATTTCTGGTGAATTGCCAACTTTTGTTGCTGATAACACTAGCAGAAGCAGTGGTGGTGGTGTTATTGAGGAGGTGGATTTGTCTAGTAATTTGTTCAATGGGACACTTCCATCTTCTCTGATTCAGTATCTAGCATCTGCAGCTGAAGGAGGGAGTTTGGTTTCTTTCAATGTTAGCAATAACAGCTTCACAGGTCAAATTCCAACCTCTCTTTTTTGCATCAATGACCATAACTCCTCCTCTCTGAGATTATTGGATTATTCCTACAATGATTTTAATGGTACTATTCAGCCTGGACTAGGAGCATGTTCTAAGTTGGAAAAGTTTAGGGCAGGATTCAATTTTCTATCAGGGATAATCCCTAGTGATATTTTTAATGCTGTTTCTCTCACTGAAATATCATTGCCTAGAAATGAACTCAATGGAACAATTGGTGATGGCATTGTTAGCCTTATCAACCTTACAGTTTTTGAGTTATACTCCAATCAGTTTATAGGTCCTATTCCCTCAGATATTGGCAATCTCTCCAATTTGGAAAGGTTACTTCTTCATGTCAATAATTTGACAGGTACTTTGCCACCATCTCTGATGAACTGTGTCAATCTTGTGGTGTTGAATTTAAGGGTCAACATGTTTGAGGGGAATCTCTCAGCATTCAACTTCTCAGGGCTCCTCAAACTTGCTACACTTGACCTTGGCAATAATCAATTTACTGGTATTTTGCCACCAACCCTGTATGCATGCAAGTCACTTGCAGCAGTGAGGCTAGCATCTAATCAGCTCGAGGGACAGATTTCACCCGAGATACTTGGTCTTCAGTCTTTGTCTTTCCTTTCAATTTCCAACAACAATCTGACGAATATCACTGGAGCACTTAGAATACTCACAGGGCTAAAGAAGCTCAGTACCCTTATGCTGTCCAAGAATTTCAACAATGAAGTAATACCGGATGATGAAAACATAACAGACCTCGGTGGATTCCAAAGTATCCAAGTTCTAGGCTTGGGGGGTTGTAATTTCAAAGGTAAAATACCACGCTGGCTTTTAAACATGAAGAAGCTTGAGGTCATGGACCTTTCGTATAATCAGATTAGTGGTTCAATTCCTCCTTGGTTGGGTACACTTCCTCAGCTTTTCTACATAGACTTGTCTTTTAACAATCTTACTGGAATCTTTCCTGTTGAGCTCACAACACTCCCAGCACTAACATCACAAAAGGCAAATGATGAAGTGCAAAGAACTTATTTGGCGTTACCTGTCTTTGCTAATGCCAACAATGTTTCTGAGATGCAATATAACCAGCTTTCAAGCCTACCACCAGCGGTATATCTCGGAAATAACAACCTCAATGGCAGTATCCCCATTGAGATTGGCCAATTGAAAGTTCTTAATCAGCTGACCCTGTGCAATAACAACTTCTCTGGCAATATACCAGATCAGATTTCAAACTTGATCAACTTGGAGAAATTAGACCTCTCAGGAAACCATCTATCTGGTGAAATTCCCGGTTCACTCAAAAGGTTACATTTCTTGTCTTTTTTTAGTGTAGCTTACAATCACCTTCAAGGACAGATACCAACCGGTGGTCAATTTGATACTTTCTCTTCCTCTAGCTTTGAAGGGAACCAACAATTGTGTGGTGCAGTTATTCAGCACTCCTGTTTTTCGCAACCAAATACTAATAGCACTGCAGCTATTCATGGTTCAAAAAATAAAATAATGATTGGACTTATCATTGTAGCCTGTTTTGGCATGGCTGCTATCGTGACAGTGTTAACACTGTGGATACTCTCCAAGAGGAGGATCAATCCAGGAGGAGATCAGGACAAGATTGAAATGGAATCAATATCTGCATACTCCAACAACAGTGGTGTTCATCCTGAGGAGGCTAGCCTAGTGGTAATGTTCCCCAACAAAACATTTGGATCCAAGGATCTTACCATATTTGATATCTTAAAAGCCACTGAAAATTTCAGTCCGACAAACATAATAGGATGTGGGGGTTTTGGCTTGGTTTACAAAGCAACATTACCAAATGGAACTATACTAGCCATCAAAAAACTTTCAGGAGATTTGGGGCTTATGGAAAGGGAATTTAAGGCAGAGGTAGAGGCTTTGTCCACAGCACAACATGAGAATCTGGTGGCATTGCAAGGCTACTGTGTGCACGATGGCTACAGGCTTATAATATATAATTACATGGAGAAGGGAAGTCTTGATTACTGGTTGCACGAAAGGGTTGATGTTTCACCTCAACTCGATTGGCCAACCCGTTTGAAGATTGCGCAAGGTGCAAGTTGTGGTCTGGGTTACTTGCATCAAATATGTGAACCACACATTGTGCATCGCGATATTAAGTCAAGCAATATACTCCTTAATGAAAAGTTTGAGGCACGTGTTGCTGATTTCGGCTTGTCTCGCTTGATCCTGCCTTACCATACTCATGTCACAACTGAACTTGTCGGTACATTAGGTTACATTCCCCCCGAGTATGGACAAGCATGGGTGGCTACTCTAAGAGGAGATGTGTATAGCTTTGGGGTTGTCTTGCTTGAGCTTCTCACTGGGAGGAGACCTGTTGATGTATGTAAGCCAAAAATGGCAAGGGAGTTAGTTGGTTGGGTTCAACAAATGAGGAATGAAGGAAAACAAGAGCAAGTCTTTGACACGATTCTAAGAGGGAAGGGATTCGAAGAAGAAATGCTGCAGGTACTTGATGTGGCCTGCATGTGTGTCAACTATAATCCTTTCAAGAGACCAAGCATCAAAGAAGTTGTTGATTTTCTACAAAATGTAGGATCAACCAACCAACAAAGGAATAAAGAGTAG 3207 0.4026 MVTLKILSFLLLSLLVVQVSSCNQFDKDSLLAFSANISVSSSYLPLNWTNSLDCCSWEGITCDVDLRVTNLSLPFRGLNGFISPSITNLTSLTHLNLSNNWLSGNLDNHFFSLLNHLLVLDLSYNHISGELPTFVADNTSRSSGGGVIEEVDLSSNLFNGTLPSSLIQYLASAAEGGSLVSFNVSNNSFTGQIPTSLFCINDHNSSSLRLLDYSYNDFNGTIQPGLGACSKLEKFRAGFNFLSGIIPSDIFNAVSLTEISLPRNELNGTIGDGIVSLINLTVFELYSNQFIGPIPSDIGNLSNLERLLLHVNNLTGTLPPSLMNCVNLVVLNLRVNMFEGNLSAFNFSGLLKLATLDLGNNQFTGILPPTLYACKSLAAVRLASNQLEGQISPEILGLQSLSFLSISNNNLTNITGALRILTGLKKLSTLMLSKNFNNEVIPDDENITDLGGFQSIQVLGLGGCNFKGKIPRWLLNMKKLEVMDLSYNQISGSIPPWLGTLPQLFYIDLSFNNLTGIFPVELTTLPALTSQKANDEVQRTYLALPVFANANNVSEMQYNQLSSLPPAVYLGNNNLNGSIPIEIGQLKVLNQLTLCNNNFSGNIPDQISNLINLEKLDLSGNHLSGEIPGSLKRLHFLSFFSVAYNHLQGQIPTGGQFDTFSSSSFEGNQQLCGAVIQHSCFSQPNTNSTAAIHGSKNKIMIGLIIVACFGMAAIVTVLTLWILSKRRINPGGDQDKIEMESISAYSNNSGVHPEEASLVVMFPNKTFGSKDLTIFDILKATENFSPTNIIGCGGFGLVYKATLPNGTILAIKKLSGDLGLMEREFKAEVEALSTAQHENLVALQGYCVHDGYRLIIYNYMEKGSLDYWLHERVDVSPQLDWPTRLKIAQGASCGLGYLHQICEPHIVHRDIKSSNILLNEKFEARVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVLLELLTGRRPVDVCKPKMARELVGWVQQMRNEGKQEQVFDTILRGKGFEEEMLQVLDVACMCVNYNPFKRPSIKEVVDFLQNVGSTNQQRNKE 1068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0594 1068 SUPERFAMILY Protein kinase-like (PK-like) 768 1055 IPR011009 -
Lal6g0594 1068 Pfam Protein kinase domain 787 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0594 1068 SMART LRR_typ_2 350 374 IPR003591 -
Lal6g0594 1068 SMART LRR_typ_2 89 113 IPR003591 -
Lal6g0594 1068 SMART LRR_typ_2 114 142 IPR003591 -
Lal6g0594 1068 SMART LRR_typ_2 610 633 IPR003591 -
Lal6g0594 1068 SMART LRR_typ_2 301 325 IPR003591 -
Lal6g0594 1068 SMART LRR_typ_2 477 501 IPR003591 -
Lal6g0594 1068 SMART LRR_typ_2 398 420 IPR003591 -
Lal6g0594 1068 PANTHER OS02G0155400 PROTEIN 8 1056 - -
Lal6g0594 1068 Gene3D Ribonuclease Inhibitor 173 250 IPR032675 -
Lal6g0594 1068 ProSitePatterns Serine/Threonine protein kinases active-site signature. 906 918 IPR008271 GO:0004672|GO:0006468
Lal6g0594 1068 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1056 - -
Lal6g0594 1068 CDD STKc_IRAK 790 1057 - -
Lal6g0594 1068 Gene3D Phosphorylase Kinase; domain 1 746 859 - -
Lal6g0594 1068 Gene3D Ribonuclease Inhibitor 23 172 IPR032675 -
Lal6g0594 1068 SMART serkin_6 784 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0594 1068 Gene3D Ribonuclease Inhibitor 345 688 IPR032675 -
Lal6g0594 1068 SUPERFAMILY L domain-like 21 267 - -
Lal6g0594 1068 Gene3D Transferase(Phosphotransferase) domain 1 860 1068 - -
Lal6g0594 1068 SUPERFAMILY L domain-like 199 531 - -
Lal6g0594 1068 ProSitePatterns Protein kinases ATP-binding region signature. 790 813 IPR017441 GO:0005524
Lal6g0594 1068 SUPERFAMILY L domain-like 556 672 - -
Lal6g0594 1068 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Lal6g0594 1068 Pfam Leucine rich repeat 456 514 IPR001611 GO:0005515
Lal6g0594 1068 ProSiteProfiles Protein kinase domain profile. 784 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0594 1068 Gene3D Ribonuclease Inhibitor 251 344 IPR032675 -
Lal6g0594 1068 Pfam Leucine Rich Repeat 91 112 IPR001611 GO:0005515
Lal6g0594 1068 Pfam Leucine Rich Repeat 612 634 IPR001611 GO:0005515
Lal6g0594 1068 ProSiteProfiles Leucine-rich repeat profile. 612 634 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0594 Lal-Chr6 3811338 3814544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0594 4 721 Miscellaneous Gene Families AT1G17240 51.591 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lal6g0594 Pkinase 1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0594 - - lang:109360872 1907.88