Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0592 ATGGTGGAGAATCGAAGGCTGGTGCTGGTTTTGATCAGCACCTGCATTCTTGGTTTAATCCCTATTCCCACCAATGGTGACACAGATCCAAATGATGTTGCTTCTCTAAAGGTTATGTTTCAAAGTATGAACTCACCATCTCAGCTAAATTGGCCTCAAAATGGTAATGATCCTTGTGGACAGTCTTGGAAAGGCATTACTTGCTCAGGCAACCGAGTCACGAAGATTAAGTTACCTGGTCTTGAACTGAGTGGAACTTTGGGTTACCAGTTACAATCCTTGACATCTCTGACTACCCTAGACTTGAGTAATAACAATCTTGGTGGAAACATACCATACCAACTTCCTCCAAATGTGAAGCACTTAAATCTTGCTAATAATAATTTCAATGGGGCGGTCCCGTATTCTCTTTCTGATATGACTTCTCTTATGGACCTGAATCTTAGTCATAATCAGCTGCAGCAAGCATTGAGTGTCAACTTTCAAAAGCTTACCTCCCTCTCTACATTGGATCTCTCTTTCAATTCTTTGACAGGAGACCTCCCTCAGACTTTGAGCTCACTTTCAAGCATATCCACCATGTATCTACAAAACAACCAGTTTACAGGCACCATTGATGTCCTTGCGAATCTGCCTCTTGAGAATCTGAATGTGGAAAACAATAAGCTTTCAGGCTGGGTACCAGAACAGCTAAAAAGCATAAACCTAAAGACGGGCGGTAATACATGGGTCTCAGGACCTGCACCCCCACCTCCTCCTGGCACACCTCCAATAACAAAAAACCAAGATCACAAATCTGGTAGACAAAGCACACCTTCAGATTCTGGCACAAGCGATGGGGGCAAGAAATCTGGTATAGGAGGTGGTGCCATTGCTGGAGTTGTGATCTCCATCTTGGTTGTTGGGGCAATAGTGGCATTCTTTCTGGTGAAGAGAAAATCCAAGAAGTCGTCTTTTGACATGGAAAAGCTTGACAATCAGCCCTTAGCTCCTCTTACCTCAAATGAAGTGCATGAAATGAATTCTATGCAATCATCATTTGTAAATGATGTGAAGGCATTTAATCCTCCTCCTGCACCCCCAATAAATCTTAAGCCTCCACCTGTGGATCGTCATAAATCAGTTGATGAGAATGAATTCTCAAGTAAGCCCATTATTGCCAAGAAGTCTGTACCAGCTCGTGCGAATGTGAAATCATATTCAGTAGCTGACCTGCAGATTGCTACTGGAAGCTTCAGTGTAGATCAACTTGTTGGTGAGGGTTCTTTTGGGCGTGTATACCGGGCTCGTTTTAATGATGGAAAGGTTCTTGCAGTGAAGAAGATAAATTCATCTGTCCTTCCCAATGATATGTCTGAAGATTTTACAGAAATAGTTTCAAGTATCTCTCATTTGCATCATCCAAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCACAAAAGTGGATCACTGCATGACTTCCTTCATCTACCCGATGAGTATAGTAACCCGTTGATATGGACTACGCGTGTCAAGATTGCTTTGGGGACTGCACGTGCCTTAGAGTACCTACATGAAGTTTGTTCACCGTCAGTTGTTCACAAGAATATTAAGTCGGCCAATATATTGCTTGATTCAGATCTTAACCCTCATCTTTCAGACAGTGGATTGGCAAGCTATATTCCAAATGCCAACCAGGTATTGAACAATAATGCTGGATCTGGATATGATGCCCCTGAAGTTGACTTGTCTGGTAATTGTAGTCTGAAGAGTGATGTATATAGCTTTGGAGTTGTCATGTTGGAACTTCTCAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGATTTGAGCAGTCTTTAGTTCGATGGGCAACACCTCAACTTCATGATATTGATGCATTGGCCAAAATGGTCGATCCTGCATTGGAAGGGCTATACCCTATTAAGTCTCTATCTCGATTTGCTGATGTTATTGCTCTTTGTGTTCAGCCGGAGCCAGAGTTCCGACCACCAATGTCGGAAGTGGTTCAAGCACTGGTTCGATTAGTGCAACGAGCTAACACAAGCAAGCGGACATATGGAGCTGATCAAGGAGGATCCAGCCGATGGGGTGATGATCAAGAGGACATGTAA 2148 0.4306 MVENRRLVLVLISTCILGLIPIPTNGDTDPNDVASLKVMFQSMNSPSQLNWPQNGNDPCGQSWKGITCSGNRVTKIKLPGLELSGTLGYQLQSLTSLTTLDLSNNNLGGNIPYQLPPNVKHLNLANNNFNGAVPYSLSDMTSLMDLNLSHNQLQQALSVNFQKLTSLSTLDLSFNSLTGDLPQTLSSLSSISTMYLQNNQFTGTIDVLANLPLENLNVENNKLSGWVPEQLKSINLKTGGNTWVSGPAPPPPPGTPPITKNQDHKSGRQSTPSDSGTSDGGKKSGIGGGAIAGVVISILVVGAIVAFFLVKRKSKKSSFDMEKLDNQPLAPLTSNEVHEMNSMQSSFVNDVKAFNPPPAPPINLKPPPVDRHKSVDENEFSSKPIIAKKSVPARANVKSYSVADLQIATGSFSVDQLVGEGSFGRVYRARFNDGKVLAVKKINSSVLPNDMSEDFTEIVSSISHLHHPNVTELVGYCSEHGQHLLVYEFHKSGSLHDFLHLPDEYSNPLIWTTRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDSDLNPHLSDSGLASYIPNANQVLNNNAGSGYDAPEVDLSGNCSLKSDVYSFGVVMLELLSGRKPFDSSRPRFEQSLVRWATPQLHDIDALAKMVDPALEGLYPIKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANTSKRTYGADQGGSSRWGDDQEDM 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0592 715 Gene3D Transferase(Phosphotransferase) domain 1 491 705 - -
Lal6g0592 715 Pfam Protein tyrosine and serine/threonine kinase 414 684 IPR001245 GO:0004672|GO:0006468
Lal6g0592 715 ProSiteProfiles Protein kinase domain profile. 412 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0592 715 Pfam Leucine Rich Repeat 166 188 IPR001611 GO:0005515
Lal6g0592 715 PRINTS Leucine-rich repeat signature 97 110 - -
Lal6g0592 715 PRINTS Leucine-rich repeat signature 164 177 - -
Lal6g0592 715 Gene3D Phosphorylase Kinase; domain 1 374 489 - -
Lal6g0592 715 PANTHER OS01G0253100 PROTEIN 18 713 IPR045271 GO:0004714|GO:0006468
Lal6g0592 715 Gene3D Ribonuclease Inhibitor 29 180 IPR032675 -
Lal6g0592 715 ProSitePatterns Protein kinases ATP-binding region signature. 418 441 IPR017441 GO:0005524
Lal6g0592 715 Gene3D Ribonuclease Inhibitor 181 247 IPR032675 -
Lal6g0592 715 SMART LRR_typ_2 140 163 IPR003591 -
Lal6g0592 715 SMART LRR_typ_2 94 121 IPR003591 -
Lal6g0592 715 SMART LRR_typ_2 164 188 IPR003591 -
Lal6g0592 715 SMART serkin_6 412 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0592 715 SUPERFAMILY Protein kinase-like (PK-like) 396 684 IPR011009 -
Lal6g0592 715 PANTHER STRUBBELIG-RECEPTOR FAMILY 6 PROTEIN 18 713 - -
Lal6g0592 715 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
Lal6g0592 715 SUPERFAMILY L domain-like 29 231 - -
Lal6g0592 715 MobiDBLite consensus disorder prediction 695 715 - -
Lal6g0592 715 MobiDBLite consensus disorder prediction 238 283 - -
Lal6g0592 715 MobiDBLite consensus disorder prediction 259 280 - -
Lal6g0592 715 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0592 Lal-Chr6 3789951 3797188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0592 8 701 Strubbelig Receptor Gene Family AT1G53730 66.714 0.0 849
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lal6g0592 PK_Tyr_Ser-Thr 1.1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0592 - - gmx:100780323 1053.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0592 6 3789951 3797188 Lal22g0536 22 3579051 3585804 LSH
Lal6g0592 6 3789951 3797188 Lal18g0308 18 2543176 2550329 LSH