Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0562 ATGGACTCGTCGCCGCCGCCGATGACGCCGGAGAAGTTACCGTTCTCTGAAGCGGAGAAGATAATACTCCGATGGGACTCCACCGCGTCGGAGGAAGCGCGTGAGAAGATGATCTTCGACGGCGACCGCCACGAAGTCGATCGCTACCTCCAAGCCGTCGATGAAATCCAACGCTCAATCTCCTCCACCTCACTCTCCGATGAGCAGAACAAAGTCAACTCCGCCGTTCAGATCGCCATGGCTCGCCTCGAAGATGAGTTCCGTAACATCCTCATCTCCCACACCATCCCCATCGAAGCTGATTCCATCACCGAACAAGAACAAGAACAACAACCTCCATCTTCTTCATCATCTTCTTCTTCCCCGATTCATCATGAAGTAGCTAATGATAGTAACTATGTTAACGATGAAGCTAACAAGCTCTTTCGTTTTAACAGTGAAGGAACTGGTTCTAGCGTAAGTGTCAATAGTAGCTACCGTTCAACTAGTAGTATTCGCGAGATCGATCTGATTCCTTCTGAAGTGGTCTGTGATCTTCGCTGCATCGCAGAACGAATGATCTCTTCAGGTTACTTACGTGAATGCATTCAGGTCTATGGAAGTGTGAGAAAATCAGCAGTTGATGCGAGTTTTCGAAAACTGGGGATCGAAAAATTGAGCATTGGTGATGTTCAAAGATTGGAGTGGGAGCAGCTTGAAACCAAGATCAGGCGTTGGATTAAAGCTGCTAAGGTTTGTGTTAGAACCCTTTTCGCGAGTGAGAAGAAGTTATGTGAACAAATCTTTGATGGGGTTGGAACTTGTATTGATGATGCTTGTTTTATGGAAACTGTGAAAGGTCCTGCTATTCAGCTTTTTAATTTTGCTGAGGCTATTAGTATCAGTAGGAGGTCACCTGAGAAGTTGTTTAAGATTCTTGACCTTCATGATGCTTTGATGGATTTGATACCTGATATTGATCTTGTGTTTGATTCTAAGTCATCCGATTCGATTCGGGTTCAGGCAGCCGAGATTCTTTCCAGGTTGGCTGAGGCTGCTAGAGGGATTTTGTCTGAGTTTGAGAATGCTGTGTTGAGGGAACCTTCTAAGGTTCCTGTCCCTGGTGGCACAATTCACCCTTTGACTAGGTATGTCATGAATTATATCAGTTTGATCTCTGATTATAAGATGACTTTGAATGAGCTCATTGTGTCGAACCCTTCCACTGGGTCGAGATATTCGGGTGATCCTTCAACCCCGGATATGGATTTCGAGGAGCTTGAGGGGAAGGCCCCTTTGTGTATTCACTTGATTTGGATTATTGTGATATTGCAGTTTAATTTGGATGGTAAGTCTAAGCATTATAAGGACCCTTCTTTGTCTCACCTGTTTATTATGAACAATGTCCACTACATTGTTCAGAAGGTGAGAGGGTCTACGGAATTGAGGGAGATGATCGGTGATGATTATTTGAGAAAACTTACCGGGAAGTTCAGGCAGGCTGCTACTAGCTACCAGAGAGCAACTTGGGTGAGGGTGTTGTATTGTTTAAGAGATGAAGGGTTGCATGTGAGTGGTGGTTTTTCTTCAGGGGTGTCAAAGAGTGCTTTGAGAGAAAGGTTCAAGGCTTTTAATACTATGTTTGAAGAGGTTCATAGGACTCAATGTGTTTGGTTGATACCAGATTCTCAACTCAGGGAAGAGCTCCGAATATCGATATCGGAGAAGCTGATACCAGCGTATAGGTCATTTCTCGGGCGGTTCAGGTGCCACATAGAGAGTGGAAAACATCCGGAGAATTACATTAAGTATTCCGTTGAAGACCTGGAGGATGCTGTTTTGGATTTTTTTGAAGGAATCCCTGTTTCTCAGCACTTGAGGAGAAGATCTAATTGA 1875 0.4453 MDSSPPPMTPEKLPFSEAEKIILRWDSTASEEAREKMIFDGDRHEVDRYLQAVDEIQRSISSTSLSDEQNKVNSAVQIAMARLEDEFRNILISHTIPIEADSITEQEQEQQPPSSSSSSSSPIHHEVANDSNYVNDEANKLFRFNSEGTGSSVSVNSSYRSTSSIREIDLIPSEVVCDLRCIAERMISSGYLRECIQVYGSVRKSAVDASFRKLGIEKLSIGDVQRLEWEQLETKIRRWIKAAKVCVRTLFASEKKLCEQIFDGVGTCIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDLVFDSKSSDSIRVQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKMTLNELIVSNPSTGSRYSGDPSTPDMDFEELEGKAPLCIHLIWIIVILQFNLDGKSKHYKDPSLSHLFIMNNVHYIVQKVRGSTELREMIGDDYLRKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNTMFEEVHRTQCVWLIPDSQLREELRISISEKLIPAYRSFLGRFRCHIESGKHPENYIKYSVEDLEDAVLDFFEGIPVSQHLRRRSN 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0562 624 Gene3D Exocyst complex component Exo70 116 620 - -
Lal6g0562 624 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 11 623 - -
Lal6g0562 624 SUPERFAMILY Cullin repeat-like 17 611 IPR016159 -
Lal6g0562 624 MobiDBLite consensus disorder prediction 103 126 - -
Lal6g0562 624 Pfam Exo70 exocyst complex subunit 238 606 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lal6g0562 624 PANTHER EXOCYST COMPLEX PROTEIN EXO70 11 623 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0562 Lal-Chr6 3615657 3617531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0562 15 623 EXO70 exocyst subunit family AT1G72470 70.779 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0562 K07195 - mnt:21391539 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0562 6 3615657 3617531 Lal18g1100 18 14038709 14040568 LSH