Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0547 ATGTCTTCTCTGAATCGCCGTTCATCACTTTCATCTTCCACAACGTCGTCTTTAGCAAAACGACATCCATCATCGTCGTCGCAGAATGTGTCTGCTAAGAAACGAGCACCACTTACCAATATCACTAATCACAGAACCACCATTGCTTCTTCCCGTAACTCCACTTTGGTACCATGTTCAAATAAGATTGTCAAGACCAAGAAAGAAATTCATCCTCCTCCTCCTCCTCCTTCAAGCACTACATCTTCGGCGAGTGCGAAGAAATTACCCTCTTTGCAGAATGTTAAATCAAGCAAAGTTATTTTGTCAAAGGTCCCACAAAAGAATTATGCTGCCTCTGTCAATGTTCTTGTTCCAAGAAGCAGTATTCATGTTTCTCCAAGTAAATCAGATGCGATGTCTGTTTCTATGAGTGATTCTATGTCTTCTTTTGATTCTATCAAGAGTCCTGAAGTTGAATATATGGATAACGAGAATGTTTCAGCTCTTGATTTAATTCAGAGAAAGACATTCAGCAACCTCAACATTTCTGATAATACTACAGAATCACCAGGTAATACATGTAGTAGAGACATAACTGTTGAGTTGGTAAGAGAGGATAAAATTATCAACATTGATAATAATTACATGGATCCACAGCTTTGTGCAACCTATGCTTGTGATATCTATAAACATCTCCGTGCATCAGAGTCAAAGAAGAGGCCTTCCACAGATTTCATGGAGAGAATTCAGAAGGACATAAACATCAGCATGCGCGCTATATTGCTCGATTGGCTTGTCGAGGTGGCTGAGGAGTATAGGCTTGTGCCTGAAACATTGTATTTAACAGTGAACTACATAGATAGATATCTTTCAGGAAATGCTGTGAATAGGCAACAGTTGCAATTACTTGGGGTTGCCTGCATGATGATTGCATCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAAGAATTTTGTTTTATAACTGATAACACATATGTCAGAGAAGAGGTTTTGCAGATGGAATCTGCCATCTTGAATTATCTTAAGTTTGAGATGACAGCCCCAACAACTCACTGTTTCTTAAGACGATTTATTCGTGCAGCTCAAGATGTCTACAAGGCTCCTTCACTGCAACTGGAGTGCTTAACCAACTACATTGCCGAATTGTCGCTCTTGGAGTACAGTATGCTTTGTTATGCACCATCACTTATAGCAGCTTCAGCAATTTTCCTGGCTAAATTTATACTTTTCCCTTCAAAGAAACCATGGAATTCCAATTTACTGCATTACACGCAATACCAGCCTTCTGATTTGTGCCGGTGTGTAAAGGACCTTCATCATCTTTGTTGCAGCAGATCTACTTCTAACCTACCTGCAATTCAAGAGAAATACAGCCAGCACAAATATAAGTATGTGGCGAAGAAGTACTGCCCTCCTTCAATACCTCAAGAATTTTTCATGAATTGA 1452 0.3967 MSSLNRRSSLSSSTTSSLAKRHPSSSSQNVSAKKRAPLTNITNHRTTIASSRNSTLVPCSNKIVKTKKEIHPPPPPPSSTTSSASAKKLPSLQNVKSSKVILSKVPQKNYAASVNVLVPRSSIHVSPSKSDAMSVSMSDSMSSFDSIKSPEVEYMDNENVSALDLIQRKTFSNLNISDNTTESPGNTCSRDITVELVREDKIINIDNNYMDPQLCATYACDIYKHLRASESKKRPSTDFMERIQKDINISMRAILLDWLVEVAEEYRLVPETLYLTVNYIDRYLSGNAVNRQQLQLLGVACMMIASKYEEICAPQVEEFCFITDNTYVREEVLQMESAILNYLKFEMTAPTTHCFLRRFIRAAQDVYKAPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLAKFILFPSKKPWNSNLLHYTQYQPSDLCRCVKDLHHLCCSRSTSNLPAIQEKYSQHKYKYVAKKYCPPSIPQEFFMN 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0547 483 PANTHER CYCLINS 25 482 IPR039361 -
Lal6g0547 483 Pfam Cyclin, N-terminal domain 221 347 IPR006671 -
Lal6g0547 483 SUPERFAMILY Cyclin-like 211 347 IPR036915 -
Lal6g0547 483 PANTHER CYCLIN-A1-1 25 482 - -
Lal6g0547 483 CDD CYCLIN 251 340 IPR013763 -
Lal6g0547 483 Gene3D - 221 469 - -
Lal6g0547 483 PIRSF Cyclin_A_B_D_E 1 479 IPR039361 -
Lal6g0547 483 SMART Cyclin_C_2 350 473 IPR004367 -
Lal6g0547 483 ProSitePatterns Cyclins signature. 252 283 IPR006671 -
Lal6g0547 483 Gene3D - 235 348 - -
Lal6g0547 483 MobiDBLite consensus disorder prediction 1 91 - -
Lal6g0547 483 Pfam Cyclin, C-terminal domain 350 469 IPR004367 -
Lal6g0547 483 CDD CYCLIN 348 441 IPR013763 -
Lal6g0547 483 SUPERFAMILY Cyclin-like 350 475 IPR036915 -
Lal6g0547 483 MobiDBLite consensus disorder prediction 1 61 - -
Lal6g0547 483 SMART cyclin_7 257 341 IPR013763 -
Lal6g0547 483 SMART cyclin_7 354 442 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0547 Lal-Chr6 3526496 3536732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0547 5 483 Core Cell Cycle Gene Families AT1G44110 62.090 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0547 K06627 - gmx:547781 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0547 6 3526496 3536732 Lal6g0547 6 3526496 3536732 ECH