Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0543 ATGAGCGATGGTATAGTGTTCGATGCAGAAGCGGGTTCATCACTGGTGAATGAACTTAGGTTAACCTTCGCTTCTGGCAAAACCCGAACTTACGCGTGGAGAGTGTCACAGCTTACTACACTCTCCAACCTCATCGACGATCATGAACAACAAATTATCGAAGCTCTTCGCTCTGACCTCGCTAAACCACCACTCGAAACCGTCGCATACGAGATTGCTATGTTGAAAAACTCTTGTAATGTCGCACTCAAGGAGTTAAAACATTGGATGACTTCAGAGAAGGTCAAAACTTCAATTGCAACATTTCCTTCTTCAGCTGAGATAGTAACTGAACCATTAGGGGTTGTGCTAGTCATCTCTGCATGGAACTATCCATTTTTGTTATCACTTGATCCTGTCATTGGAGCTATTGCAGCCGGTAATGCTGTGGTTCTAAAACCATCAGAAATTTCTCCAGCTACGTCATCACTGCTGGCAAAATTGCTATGGGATTATATGGATAACTCGTCTGTAAGAGTTGTTGAGGGAGCAGTTGATGAAACATCTGCATTACTGCAGCAGAAGTGGGACAAGATTTTCTATACAGGTAATGGAAGAGTAGCACGAGTAGTGATGGCCGCTGCTGCAAAACATCTTACACCTGTAGTGCTGGAGCTTGGAGGAAAATCCCCAGTTGTTGTTGATTCAAATATCAATTTAGAAGTAGCAATCCGACGGATAATTGCAGGGAAGTGGGGTAGTAACAATGGACAAGCTTGCATTTCTCCAGATTATATTATAACAACAAAAGAATATGCTCCCAAATTGGTGGATGCCCTGAAGGCTGAATTGGAGAAATTTTATGGAAAGAACCCATTGGACTCCCAAGATTTGTCCCGTATTGTGAACTCCAACCACTTTGCTCGCTTGACAAAGCTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAACTGAGGATTGCCCCCACTGTTCTGTTGGATATCCCTAGAGATTCTCTGATAATGAGTGAGGAGATATTTGGTCCTTTACTTCCAATCATCACGGTGGATAAACTGGAAGAAAGCTTCGATGTGATTAATTCAGGTCCAAAGCCTCTTGCTGCATACGTGTTTACAAACAACAAGGCGCTCAAGGAACAATTTGTAACAACTGTTTCTGCTGGGGGTTTGGTTGTCAATGATACTGCTATACATCTTGCTGTTCATACTTTACCATTTGGCGGAGTTGGGGAAAGTGGAGTGGGTGCATACCATGGGAAATTCTCATTTGATGCTTTTAGCCACAAAAAGGCAGTTCTTTATCGCGGTTTTATGGGCGATGCATCAATAAGGTACCCGCCATACACAAATACAAAAATGAGATTGCTGAAGGCTCTTATAGGTGGTGGCATACTTGATATAATCCGTTCGCTTTTTAGATGGTCATAG 1455 0.4247 MSDGIVFDAEAGSSLVNELRLTFASGKTRTYAWRVSQLTTLSNLIDDHEQQIIEALRSDLAKPPLETVAYEIAMLKNSCNVALKELKHWMTSEKVKTSIATFPSSAEIVTEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEISPATSSLLAKLLWDYMDNSSVRVVEGAVDETSALLQQKWDKIFYTGNGRVARVVMAAAAKHLTPVVLELGGKSPVVVDSNINLEVAIRRIIAGKWGSNNGQACISPDYIITTKEYAPKLVDALKAELEKFYGKNPLDSQDLSRIVNSNHFARLTKLLDDDKVSGKIVYGGEKDESKLRIAPTVLLDIPRDSLIMSEEIFGPLLPIITVDKLEESFDVINSGPKPLAAYVFTNNKALKEQFVTTVSAGGLVVNDTAIHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRGFMGDASIRYPPYTNTKMRLLKALIGGGILDIIRSLFRWS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0543 484 PANTHER ALDEHYDE DEHYDROGENASE 5 484 IPR012394 GO:0006081
Lal6g0543 484 PIRSF ALDH 6 476 IPR012394 GO:0006081
Lal6g0543 484 Pfam Aldehyde dehydrogenase family 28 441 IPR015590 GO:0016491
Lal6g0543 484 PANTHER ALDEHYDE DEHYDROGENASE 5 484 - -
Lal6g0543 484 SUPERFAMILY ALDH-like 16 457 IPR016161 GO:0016491
Lal6g0543 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 22 439 IPR016162 GO:0016491
Lal6g0543 484 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Lal6g0543 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0543 Lal-Chr6 3487685 3494755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0543 72 481 Aldehyde Dehydrogenase Gene Family AT1G44170 74.878 0.0 660
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0543 6 3487685 3494755 Lal6g0543 6 3487685 3494755 ECH