Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0542 ATGGGGGGGAATAGTTTCATCTGCTGCACATCAATGTTGACTCTTCAACCCACACATGAGTCAACTAGTCAACACCCTCCTCATATACTTATATCTGAGCCTTGTCACTTTGATTATCTATACCACACTAATCAAAGCTCTCTAATTATGTCACTTGGAGAATCATCCCCGCAATGGAAATACCATGTTTTCTTGAGTTTTAGAGGAGGTGACACCCGCTTAAGCTTTACTAATCACTTATATGCTGCGTTGGTGCGAAAAGGAATCATAACTTTTCGAGATGACAAACAACTTGAGAAAGGAGATGCCATTTCTCAACAACTGCATCAATCAATTCAACAGTCTCTCGCTGCAGTTGTTGTTATCTCGGAGAACTATGCTTCTTCCACTTGGTGTTTGGATGAGCTGAAACTAATTCTTGAATCGAAAATAGATGTTTTTCCAGTCTTTTATGGTGTCAATGTTTCTGATGTTCGATACCAGAAAAATAGTTTTGCTGAGGCTTTCAAAAAACATGTTGTAAGATTTGAACAAGACAAAGAGAAAGTGCAAAAATGGAGAGATTCCTTGAAAGAAGTTGCTGATTTTTCTGGATGGGAGTCCAAGGACATGGCTGAAGCAGAACTCATTGAAGAGATTATTGAAAAGGTATGGATAAAACTACAACCAAAATTGCCATCCTACAATGAAGGAGTGGTTGGATTTGATTCAAGGGTCAAGAAAGTGAATTCACTTTTAAGCGTAGGATCACAAGATATTCGGTTTATAGGGATATGGGGTATGGCTGGAACTGGAAAAACAACTCTTGCTAGAGTAATATACGAAACAATAAGTAGCCGCTTTGAAATTAAATGTTTCCTTCTTAATGTCAGAGAGGTTTCTCAAACATCTGATGGATTGGTTTCATTACAAAGAAAACTTCTTTCTGCCCTTAAGATAAGCAACCTAGAAATTGATGATTTGTATGATGGAAAGAATAAAATTATGAACCTTTTGTGCAACAAAAGTGTTCTTCTGGTCCTTGATGACATTAGTCATTTAAGTCAGCTAGAGAATTTGGCTAAAACTAAAGGTTGGTTTGGTCCAGGCAGCAGAGTGATAATAACAACCAAAGATATGCACTTACTAGTATCACATGGTGTGTGTGAGAAGTATGAGATGAGAATCTTAAATGAAAGTTCTTCCTTTCAACTCTTCAGCCAGAAAGCATTCAGAAGAGATCAACCTCCAGAGGGTTATTTAGAAATAACTAAAAGTATGGTCGAATATGCTGGAGGTCTTCCCTTGGCACTTAAAGTGTTGGGTTCTTTTGTTTGTGGAAGAAGTCTCTGTCAGTGGAAGGATGCTTTGACAAAGATAAAACAAGTTCTGCCGGAAGACATTTTGAACACACTAAGAATAGGTTATGATGGACTGGAAGATGCAGAAAAGGCTTTGTTTTTAGATATTGCTTTCTTCTTTACAGGACGGTCGAAAGTTGAAGTGATACAAATATTAGCAGATTGTGGCCTTAATCCAACAATTGGAATAAGTCTTCTTATTGAAAAATCTCTAGTAAGTTGTTGTGGAGGAATTTTGGAAATGCATGATTTGCTTCAAGAAATGGGTAGAAATATTGTATATCAAGAGTCTCTTGATGATGCAAGCAGACGCAGTAGGTTATGCTCTTTAGAAGATATTAACCGAGTATTCAGAAAAAATAAGGGAACCAATATCATTCAAGGAATAGTTCTGAAATCAAGTGACCCACTTGAAGCATATTGGCATCCTGAAGCCTTCTCAAAAATGGGTAATCTTGGAGTACTCATCATTTTGTGTGATTTGAGCCTTCCCCTCGGCCTCAAATGTCTCTCTAGTTCATTAAAAGTTTTGGAATGGAAGGGTTATCCTTTGGAATATCTACCGCTTGGTCTGCAACTGCTAGAACTTCTTCACTTGAAAATGCATTGCAGCAAACTTAAACGAGTTTGGAATGGAACTCAAATTTTCAGAGAGCTAAAATCAATTGATCTCAGTGATTCCAGAGATCTAATTCAAACTCCAAATATTTCTGAGGTTCCATGTCTTGAGAGTTTAGTTTTGAAAGGTTGTATAAATCTTGTTGAGGTTCATCAATCTGTTGCAAAGCACAAAAATGTTGCTATGCTAGACCTGGAAGGTTGCATCAGTCTTAAGACCCTGCCCAGAAAATTGGAGATGAATGCTTTGGAGAAGCTCATTCTTTCTGGCTGCTCACAAATTAAAAAGCTTCCCAAATTTGGGGAGAGTATGGAATGTCTATCTATACTTAATTTAAGAGATTGCACAAGTCTTGTTTGTCTTCCACAGAGTATTCGAAACATGAAATCCTTTAGAGATCTCAATATCCATGGTTGCTCAAAATTGTTTAGGATGACGAACAATTCAAATAAGAATAATGTTGTGGAAGAAATTGATGACACTGAAACAGCTATGAGAGAAGTGCATTCATCTGCCATTGATTTAAAATCCCTGAACATGTTATTAAACAAAGGATATGATTGGTTAATTACCAACTCAAGCTTTTCTCTCCTTACTGAGAAAGTGTTTGATTTCATAAGGTATCCAGTTAGCATGGGCTCGATGTTGCCTCCTCTCTCAAGTTTCCCTCGGTTGAAGAAGTTAAATATGGGCAATTGTAATCTCAGTGATGGATCAATTATAGATCATATTGGACATTTAACATCACTTGAAGTATTATATTTAGCTGGGAACAACTTTGTTGACCTTACAGCAAGCATTGGTAATCTTTCTCGGCTACAACGCCTTGGTTTATACAAATGCCAAAGGCTTAGAACACTGCCCGAGCTTCCACCCAGTGTATGCCAGTTACTTATGAACGACTGCACTCAACTGGAACCTATGTTATTCGACACTCAAAGAATTTGGAAAATATTTGAGGCAAATAGATGGAACCTGACACGCGAATTGTGGTTCCTGATTCCAGGGAGTGAAATCCCACCATGGTTTGAGCATCAATATTATTTTCCCCTGAAACCGAGTTGA 3024 0.3767 MGGNSFICCTSMLTLQPTHESTSQHPPHILISEPCHFDYLYHTNQSSLIMSLGESSPQWKYHVFLSFRGGDTRLSFTNHLYAALVRKGIITFRDDKQLEKGDAISQQLHQSIQQSLAAVVVISENYASSTWCLDELKLILESKIDVFPVFYGVNVSDVRYQKNSFAEAFKKHVVRFEQDKEKVQKWRDSLKEVADFSGWESKDMAEAELIEEIIEKVWIKLQPKLPSYNEGVVGFDSRVKKVNSLLSVGSQDIRFIGIWGMAGTGKTTLARVIYETISSRFEIKCFLLNVREVSQTSDGLVSLQRKLLSALKISNLEIDDLYDGKNKIMNLLCNKSVLLVLDDISHLSQLENLAKTKGWFGPGSRVIITTKDMHLLVSHGVCEKYEMRILNESSSFQLFSQKAFRRDQPPEGYLEITKSMVEYAGGLPLALKVLGSFVCGRSLCQWKDALTKIKQVLPEDILNTLRIGYDGLEDAEKALFLDIAFFFTGRSKVEVIQILADCGLNPTIGISLLIEKSLVSCCGGILEMHDLLQEMGRNIVYQESLDDASRRSRLCSLEDINRVFRKNKGTNIIQGIVLKSSDPLEAYWHPEAFSKMGNLGVLIILCDLSLPLGLKCLSSSLKVLEWKGYPLEYLPLGLQLLELLHLKMHCSKLKRVWNGTQIFRELKSIDLSDSRDLIQTPNISEVPCLESLVLKGCINLVEVHQSVAKHKNVAMLDLEGCISLKTLPRKLEMNALEKLILSGCSQIKKLPKFGESMECLSILNLRDCTSLVCLPQSIRNMKSFRDLNIHGCSKLFRMTNNSNKNNVVEEIDDTETAMREVHSSAIDLKSLNMLLNKGYDWLITNSSFSLLTEKVFDFIRYPVSMGSMLPPLSSFPRLKKLNMGNCNLSDGSIIDHIGHLTSLEVLYLAGNNFVDLTASIGNLSRLQRLGLYKCQRLRTLPELPPSVCQLLMNDCTQLEPMLFDTQRIWKIFEANRWNLTRELWFLIPGSEIPPWFEHQYYFPLKPS 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0542 1007 PRINTS Disease resistance protein signature 255 270 - -
Lal6g0542 1007 PRINTS Disease resistance protein signature 331 345 - -
Lal6g0542 1007 PRINTS Disease resistance protein signature 424 438 - -
Lal6g0542 1007 PRINTS Disease resistance protein signature 661 677 - -
Lal6g0542 1007 Gene3D Ribonuclease Inhibitor 580 732 IPR032675 -
Lal6g0542 1007 Gene3D Ribonuclease Inhibitor 825 968 IPR032675 -
Lal6g0542 1007 Gene3D Ribonuclease Inhibitor 733 823 IPR032675 -
Lal6g0542 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 220 483 IPR027417 -
Lal6g0542 1007 SUPERFAMILY L domain-like 578 962 - -
Lal6g0542 1007 Pfam TIR domain 60 227 IPR000157 GO:0007165
Lal6g0542 1007 ProSiteProfiles TIR domain profile. 59 225 IPR000157 GO:0007165
Lal6g0542 1007 Gene3D - 389 473 IPR042197 -
Lal6g0542 1007 Gene3D - 222 384 IPR027417 -
Lal6g0542 1007 Gene3D - 55 221 IPR035897 -
Lal6g0542 1007 PANTHER TMV RESISTANCE PROTEIN N-LIKE 760 958 - -
Lal6g0542 1007 PANTHER TMV RESISTANCE PROTEIN N-LIKE 67 749 - -
Lal6g0542 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 67 749 IPR044974 GO:0006952
Lal6g0542 1007 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 760 958 IPR044974 GO:0006952
Lal6g0542 1007 Pfam NB-ARC domain 239 455 IPR002182 GO:0043531
Lal6g0542 1007 SMART till_3 60 196 IPR000157 GO:0007165
Lal6g0542 1007 SUPERFAMILY "Winged helix" DNA-binding domain 460 563 IPR036390 -
Lal6g0542 1007 SUPERFAMILY Toll/Interleukin receptor TIR domain 54 199 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0542 Lal-Chr6 3474478 3484026 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0542 61 835 WRKY Transcription Factor Family AT4G12020 29.028 1.40e-83 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0542 - - lang:109363418 1197.57