Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0520 ATGGATAATATGACATGTTTTGAGAAGGTAAGAGCATGGTTCACCAATTCAAAGTCATTTTTGTTAATATTAAGCTTGCAATTTGGTTCAGCTGGCATGTATGTTATCACCAAGGATGCTCTCAATAAGGGAATGAGTCATTATGTGTTCGTCGTTTATCGTAATTGCATCGCCACCGTAGCTCTTGCCCCCTTCGCATTTTTTCTTGAAAGGAAAATTAGGCCAAAGATGACGGCTAGAATATTTACAGAGATAATGGCACTGGCTTTTGTCGAGATAATACTTGATCAGTGCTTCACCTTCTTGGGGATGAAACTAACGTCAGCATCCTTTGCATCTGCTGTGATGAACTCTGTACCCTCCATTACCTTTGTTTTGGCAATCATTTTTCGATTGGAGAGCATGAGAATAAAGGAGCTTGGATGTCAAGCAAAGGTGATAGGGACAGTGGTGAGTCTTGGAGGAGCACTTCTAATGGCAATGTACAAGGGTCCTCTAGTTAACATTATGAAGTCATCAACCAATCATGTGGGACAACCTGGGAATGTTAATGACCCTAGTGGGGACCATTGGCTCATGGGTGCATGCTTCCTCCTCATAGGTTGTGCTGGCTTCTCTTGTTTCTACATATTGCAAACCATAACATTGAGGAAGTACCCAGCAGAAATGTCCCTAGCCACTTGGGTTTGTTTTATTGGAGCACTACAAAGCACTGCAGTCACACTTTTTATGGAACGTCATGACACTCATGTTTGGTCTATTGGCTTTGATTCAAGCCTTTTTGCTTCTGCATATTCGGGAATTGTAACATCAGCAATCCAATTTTATGTGCAAGGCAAGGTCATTAAAACCACTGGCCCAGTTTTTGTCACAGCTTTTAATCCTTTGCGTATGATCATAGTCACAGCCTTGGCCTGCCTACTCCTAGCTGAGAAACTCTACCTTGGAAGCATTATTGGAGGAGTGGTGGTGGTTGTGGGACTGTACTTAGTTGTGTGGGGAAAATCTAAAGAACAGAAGAAACGTCTTATGCCACCGTCGCCAGAAAAGGAGATCAACCTGCAGCTACCAGTTACTGTCCCCATAAATGAAAGCAAGACTGATAATAAAACTCACTTTGTTGCAGATACAAACAACGATATAGAAGCCTAA 1152 0.4219 MDNMTCFEKVRAWFTNSKSFLLILSLQFGSAGMYVITKDALNKGMSHYVFVVYRNCIATVALAPFAFFLERKIRPKMTARIFTEIMALAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLESMRIKELGCQAKVIGTVVSLGGALLMAMYKGPLVNIMKSSTNHVGQPGNVNDPSGDHWLMGACFLLIGCAGFSCFYILQTITLRKYPAEMSLATWVCFIGALQSTAVTLFMERHDTHVWSIGFDSSLFASAYSGIVTSAIQFYVQGKVIKTTGPVFVTAFNPLRMIIVTALACLLLAEKLYLGSIIGGVVVVVGLYLVVWGKSKEQKKRLMPPSPEKEINLQLPVTVPINESKTDNKTHFVADTNNDIEA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0520 383 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020|GO:0016021
Lal6g0520 383 Pfam EamA-like transporter family 20 160 IPR000620 GO:0016020|GO:0016021
Lal6g0520 383 PANTHER WAT1-RELATED PROTEIN 14 354 IPR030184 GO:0016021|GO:0022857
Lal6g0520 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 337 - -
Lal6g0520 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 162 - -
Lal6g0520 383 PANTHER WAT1-RELATED PROTEIN 14 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0520 Lal-Chr6 3326308 3329427 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0520 18 379 Nodulin-like Gene Family AT2G39510 45.055 1.30e-111 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0520 - - gmx:100813852 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0520 6 3326308 3329427 Lal6g0520 6 3326308 3329427 ECH
Lal18g1130 18 14244966 14250532 Lal6g0520 6 3326308 3329427 LSH