Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0514 ATGGTTAAGAGAGAGAACAACAAGATCCACACCACTCAATCATCAAAGTCAATGCAATCTTTATCTTCACCATCAGCTGCATCATCAAATGACAAGAAGAAGAAGTACAAAGGTGTCAGAATGAGGAGCTGGGGCTCATGGGTTTCAGAGATTAGAGCACCAAACCAGAAAACAAGAATATGGTTAGGATCTTATTCAACTGCTGAGGCTGCAGCAAGAGCCTATGATGCTGCACTTCTATGCCTTAAAGGCTCCTCAGCAAATCTTAACTTCCCTTTAACTTCTTCACATTATATTCCTCAACAAAACACTGCTATGTCCCCAAAATCAATCCAAAGGGTAGCTGCAGCTGCTGCTAACAGTTTCATGGACAATGCTAATAGTAATAGTAGCATTGCTCCACCTTCCACTCTTATTGTTTCAACCTCATCATCATTGGTCTCATCTCCAATATCAATGTCTTCCTCTCCTTCTAATCAAATAGATGATGATTTCTCACTACTCTCATCATTTAAGGCATACACTAGCTGTGATCAAACACATGAATCAATGGCTATGATGGACTCTTGGTATGGTTTTGATGGATATCATGTTGATCAAATGCTAAGTGGGACATTGTTTGATATTGATTCAACTCAGCTGTTTGATGATCTATATGAAGAAAGTGATATTCGTTTGTGGAACTTCCGCTGA 693 0.3939 MVKRENNKIHTTQSSKSMQSLSSPSAASSNDKKKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPLTSSHYIPQQNTAMSPKSIQRVAAAAANSFMDNANSNSSIAPPSTLIVSTSSSLVSSPISMSSSPSNQIDDDFSLLSSFKAYTSCDQTHESMAMMDSWYGFDGYHVDQMLSGTLFDIDSTQLFDDLYEESDIRLWNFR 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0514 230 MobiDBLite consensus disorder prediction 11 29 - -
Lal6g0514 230 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Lal6g0514 230 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Lal6g0514 230 PIRSF PTI6 137 228 IPR017392 GO:0003700
Lal6g0514 230 PIRSF PTI6 1 146 IPR017392 GO:0003700
Lal6g0514 230 MobiDBLite consensus disorder prediction 1 37 - -
Lal6g0514 230 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
Lal6g0514 230 SUPERFAMILY DNA-binding domain 35 93 IPR016177 GO:0003677
Lal6g0514 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 229 - -
Lal6g0514 230 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Lal6g0514 230 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Lal6g0514 230 Gene3D AP2/ERF domain 34 94 IPR036955 GO:0003700|GO:0006355
Lal6g0514 230 Pfam AP2 domain 35 84 IPR001471 GO:0003700|GO:0006355
Lal6g0514 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 11 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0514 Lal-Chr6 3287202 3287894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0514 36 229 AP2-EREBP Transcription Factor Family AT1G21910 49.749 1.42e-51 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lal6g0514 AP2 4.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0514 - - gmx:100813313 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0514 6 3287202 3287894 Lal6g0514 6 3287202 3287894 ECH