Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0505 ATGAATCACTTACCTCGATTTTTCGGTCATAGAAAGGAACCTAAAAATACCATGGATTCGAAGAAGATTCGACGAAAACCGAAGCTCGATCGCCGCAACGCTGTGAAGAATTTTGAATACGAAGCCGGTTCGGAAGACCCAAGTTCTTCCGGTTCGGTTCTCTACACTCGATCGATGGATTTCTACGACCGAACCAGCTTCCGAATCGAGGGCGTTGATGGCGAGTTTGATCGGTTTTGTCAGAGCCTCGGGCTATCTGGACCGGAAGATTTCTCGATCCCCGTCGCGGCGTGGGAGGCTATGAGGTTTCGGTCTTCTTCTGATGTTCTGCCGAGGCTGATGCAGATCGAGTTGGAAGACGCAAAGAAAAATGAGGAAATTGAAGTAACGGTGGTTGAATTGAGTGATAAATTTGAAGATGAGGTTTCAATTAGGGACAGTGATGATTGTGTTCAAGTGGAGACTGCTAAAACCAGTGGTAGTTGCAGCAGCGGCGGCGGTATCAAGGGATTCCGTCCTCCGATGCTTAAACCGCCACCGGGAATTAGAGTCTCGGCAGTGGATAATGATTCGTCAACTTGGGACCTATTGAGGGATTTTGCTCCGCAAGGTGAAGGAGGAGAGACGGAGAATTCTGTATTGAATGGTGATGATGACGAAGTAGAAGAAGGAAAGGCGAAGGAGGAAGAAGAAGAAAAAGGGGTGAGTGGGAAGAGAGAAGAGGAGGAAAATGAAGCGATATTTGCGGAGATTGCTGAGGAGTTTTCACTTTCAGGGTCGTGTTCATTTTCAACTTCGAATGAAGATGATTCATGTAGTAGTAGCACGGGTCCTAGGTCTAATAATATATCTCCTAATGAGAGATTTAAGCGCATTATCACTAATTGGCAAAAGGGTGAGCCTTTGGGGCGTGGTTCCTTTGGGTCTGTTTATGAAGGAATTGCTGGTCATAAATTTCATGTTTTGCAAGTGTCAACTACTAGTTCTTTAATATCTTCTGGTTATTACTGTAGAGATGGATTCTTTTTTGCTGTAAAAGAAGTTTCACTGCTAGATCAAGGGAGCCAAGGAAGGCAAAGCGTCTGTCAACTGGAGCAGGAGATCGCACTTTTGAGTCAGTTTGAACACGAGAATATAGTTCAATACTATGGCACAGAAATGGATGAATCAAATTTATATATCTTTATTGAGCTTGTAACGAAAGGTTCCCTTGCCAGCATCTACCGGAGGTATAATCTTGATTCCCAAGTACCGGCCTATACAAGACAGATTCTGCATGGTTTAAAGTATCTTCATGATCGAAATGTCGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAATGGATCTGTCAAGCTTGCAGATTTTGGATTGGCTAAGGCAACTGTCAAATTGAATGATATCAAATCTTGCAAGGGAACAGCATTCTGGATGGCCCCAGAGGTTGTAAAAGGAAAGAACCAAGGTTATGGGCTTCCAGCTGATATATGGAGTCTGGGATGCACTGTGTTGGAGATGTTAACAGGCAAAATTCCATACTCACATTTGGAATGTATGCAGGCATTGTTTAGAATTGGAAAAGGTGAGCTACCTCGTGTCCCTGATTCTCTTTCAAAAGATGCACGAGATTTTATATTGCAGTGTCTTAAAGTTAATCCAGATGATCGTCCCACTGCTGCTCATCTCTTAAACCATCCATTTGTTCAAAGACCACTTTCCCAGTCCTCTGGCTCTGCATCTCCTATATTCTCATAA 1764 0.4348 MNHLPRFFGHRKEPKNTMDSKKIRRKPKLDRRNAVKNFEYEAGSEDPSSSGSVLYTRSMDFYDRTSFRIEGVDGEFDRFCQSLGLSGPEDFSIPVAAWEAMRFRSSSDVLPRLMQIELEDAKKNEEIEVTVVELSDKFEDEVSIRDSDDCVQVETAKTSGSCSSGGGIKGFRPPMLKPPPGIRVSAVDNDSSTWDLLRDFAPQGEGGETENSVLNGDDDEVEEGKAKEEEEEKGVSGKREEEENEAIFAEIAEEFSLSGSCSFSTSNEDDSCSSSTGPRSNNISPNERFKRIITNWQKGEPLGRGSFGSVYEGIAGHKFHVLQVSTTSSLISSGYYCRDGFFFAVKEVSLLDQGSQGRQSVCQLEQEIALLSQFEHENIVQYYGTEMDESNLYIFIELVTKGSLASIYRRYNLDSQVPAYTRQILHGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATVKLNDIKSCKGTAFWMAPEVVKGKNQGYGLPADIWSLGCTVLEMLTGKIPYSHLECMQALFRIGKGELPRVPDSLSKDARDFILQCLKVNPDDRPTAAHLLNHPFVQRPLSQSSGSASPIFS 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0505 587 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 62 334 - -
Lal6g0505 587 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 337 583 - -
Lal6g0505 587 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 62 334 - -
Lal6g0505 587 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 337 583 - -
Lal6g0505 587 MobiDBLite consensus disorder prediction 198 243 - -
Lal6g0505 587 MobiDBLite consensus disorder prediction 212 226 - -
Lal6g0505 587 MobiDBLite consensus disorder prediction 260 285 - -
Lal6g0505 587 Pfam Protein kinase domain 337 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0505 587 ProSiteProfiles Protein kinase domain profile. 296 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0505 587 MobiDBLite consensus disorder prediction 1 28 - -
Lal6g0505 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Lal6g0505 587 Coils Coil 225 245 - -
Lal6g0505 587 Gene3D Transferase(Phosphotransferase) domain 1 293 583 - -
Lal6g0505 587 MobiDBLite consensus disorder prediction 1 24 - -
Lal6g0505 587 MobiDBLite consensus disorder prediction 227 243 - -
Lal6g0505 587 SMART serkin_6 296 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0505 587 SUPERFAMILY Protein kinase-like (PK-like) 273 575 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0505 Lal-Chr6 3242989 3249451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0505 21 575 MAP Kinase Kinase Kinase AT4G08500 50.327 9.98e-167 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal6g0505 Pkinase 1.9e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0505 K13414 - gmx:100819177 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0505 6 3242989 3249451 Lal6g0505 6 3242989 3249451 ECH
Lal6g0505 6 3242989 3249451 Lal4g0395 4 2712062 2717060 PCT
Lal4g0395 4 2712062 2717060 Lal6g0505 6 3242989 3249451 PCT