Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0491 ATGGGTTCAGTGCATCATACTGAGGTTTCCAGTATGAGAGAGCAAGGAGTCTTTAGTCTTGAAGATAATGGTCATTCAGAGAGGTCACAGTGGATGTTGGATTCTCCAAATCCACCACCTCTATGGAAGAAGTTATTTAGTTCAGTTAAAGAGACCATCTTCCCTCATGGAAACAAGTTTTGCTTTTCATCCAAGAAGAAAACATGCCAAGGCCATGTTGTTTCATTCTTGCAAAGTTTATTCCCTATCCTAAGTTGGTTGAGAAATTACAAAGCCTCCAAGTTCAAAGATGATTTGTTAGCTGGCTTAACTCTTGCCAGCTTAAGCATACCTCAGAGCATAGGATATGCTAATTTAGCAAAACTTGATCCTGAATATGGTCTTTATACAAGTGTAGTTCCTCCTCTTATTTATGCTATGATGGGGAGCTCAAGAGAAATTGCAATTGGACCTGTAGCTGTAGTGTCATTGCTGTTATGCTCCTTAGTTCAGAAAGTGGAAGATCCTGTTGCTAATCCTCATGCCTATAGAAATTTTGTCTTTACCGTGACCTTCTTCACCGGAATCTTTCAAACTGCATTCGGAGTTTTCAGATTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCCTAGTTGGATTCATGGCAGGAGCAGCCATCATCATTGGTCTTCAGCAGCTCAAGGGATTGCTTGGTATTAGTCACTTTACCACAAAAACAGATGCAGTATCAGTGCTGACATCTGTTTATAAGTCACTGCATCATCAAATTACTTCTGCAGAAAAAGGAAGAAGAAACAAAAAGCTTTTCTGGTTGCCTGCTATCTCTCCTCTTCTATCAGTTGTAATATCAACTTTAATTGTGTATTTGTCTAAAGCTGATAAGCATGGAATTAATATAATAAAGCATGTCAAAGGAGGCCTTAATCCAAGTTCAGCTCACCTATTAGAATTCCATGGTGAACATGTTGGACAAGCAGCTAAAATTGGATTGATTTGTGCAATTATCGCGCTTACTGAAGCTATTGCTGTTGGTCGATCTTTCGCTTCGATCAAAGGATACCACCTTGATGGCAACAAAGAAATGTTGTCAATGGGATTCATGAACATTGCAGGATCTTTAAGTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGAACAGCAGTAAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCAATTACTGTGATTGTATCACTTGAATTGTTTACAAGGCTCTTATACTATACACCTGTGGCTATACTTGCTTCTATAATTCTCTCTGCACTTCCTGGATTAATTGACATAAGTGAAGCTTGCTATATCTGGAAGGTTGACAAATTAGATTTTCTTGCATGTGTTGGTGCTTTCCTTGGTGTTTTGTTTGCATCCGTAGAGATTGGTCTTATTGTTGCAGTAACAATCTCATTTGCAAAGATACTAATACAAGCAATTAGACCTGGGATAGAAGTCCTAGGTAGAGTTCCAAGAACAGAAGCTTTCTGTGATGTTACTCAATACCCAATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCTAATTTTTGGGTCAGTGAAGATGATGATCTTAAATCAACTGCCAAGGGAAGGGTCCAAGCAGTAATCCTAGACATGACAAACTTGATGAATGTTGATACTTCTGGAATTCTAGCACTGGAAGAATTGCACAAGAGGTTGCTTTCACGTGGCGTAGAATTAGCAATGATCAACCCAAGGTGGCTTGTAATTCACAAACTTAAGCTTGCACACTTTGTGGACAAAATTGGGAAACAATGGATTTTCCTTACTGTTGGGGAAGCAGTAGATGCATGCATCTCTTCTAAATTTGCTAGCCCTTGA 1908 0.3947 MGSVHHTEVSSMREQGVFSLEDNGHSERSQWMLDSPNPPPLWKKLFSSVKETIFPHGNKFCFSSKKKTCQGHVVSFLQSLFPILSWLRNYKASKFKDDLLAGLTLASLSIPQSIGYANLAKLDPEYGLYTSVVPPLIYAMMGSSREIAIGPVAVVSLLLCSLVQKVEDPVANPHAYRNFVFTVTFFTGIFQTAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGISHFTTKTDAVSVLTSVYKSLHHQITSAEKGRRNKKLFWLPAISPLLSVVISTLIVYLSKADKHGINIIKHVKGGLNPSSAHLLEFHGEHVGQAAKIGLICAIIALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIAGSLSSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVIVSLELFTRLLYYTPVAILASIILSALPGLIDISEACYIWKVDKLDFLACVGAFLGVLFASVEIGLIVAVTISFAKILIQAIRPGIEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANANFWVSEDDDLKSTAKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMINPRWLVIHKLKLAHFVDKIGKQWIFLTVGEAVDACISSKFASP 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0491 635 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Lal6g0491 635 Pfam STAS domain 512 623 IPR002645 -
Lal6g0491 635 PANTHER SULFATE TRANSPORTER 21 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal6g0491 635 PANTHER SLC26A/SULP TRANSPORTER-RELATED 21 633 - -
Lal6g0491 635 ProSiteProfiles STAS domain profile. 528 627 IPR002645 -
Lal6g0491 635 TIGRFAM sulP: sulfate permease 82 623 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal6g0491 635 CDD STAS_SulP_like_sulfate_transporter 512 620 - -
Lal6g0491 635 SUPERFAMILY SpoIIaa-like 518 627 IPR036513 -
Lal6g0491 635 Gene3D STAS domain 491 630 IPR036513 -
Lal6g0491 635 Pfam Sulfate permease family 95 459 IPR011547 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0491 Lal-Chr6 3148347 3153026 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0491 25 631 Inorganic Solute Cotransporters AT5G10180 62.085 0.0 797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0491 K17469 - gmx:100776591 1068.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0491 6 3148347 3153026 Lal6g0491 6 3148347 3153026 ECH
Lal6g0491 6 3148347 3153026 Lal17g0433 17 2927786 2933252 PCT
Lal17g0433 17 2927786 2933252 Lal6g0491 6 3148347 3153026 PCT