Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0490 ATGGGTCATCAAGGTGATGAAAATCTTGAAACAAAAGAGATGGGTGAGAGAAGTTTGTCAATTTCACGTGGCCAGGTACCATATGTTCACAAAGTGGGAGTTCCTCCAAGACAAAACCTCTTCAAGGAATTCCAAGCCACAGTCAAAGAAACATTCTTCTCTGACGATCCTCTTCGCTCCTTCAAGGATCAAACTAAATCCCGGAAATTCATCTTAGGCATTGAAGCCATATTTCCCATACTTAGTTGGGGGAGAAATTACACTTTTAAAAATTTTAGAGGAGACCTTATAGCTGGTCTTACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAGCTTGCAAATTTGGCTCCACAGTATGGACTCTTTGTTCCACCACTGATTTATGCTGTCATGGGTAGTTCTCGTGATATTGCAATTGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTTCAGAATGAGATTGATCCTATTGCAAATCCAACAGATTATCGGCGACTTGCTTTTACTGCGACCTTTTTCGCTGGGATTACTCAAGCAACTCTTGGGGCTTTTAGGTTAGGATTTTTGGTTGACTTCCTATCCCATGCTGCAATTGTTGGTTTTATGGGGGGAGCTGCTATCACAATTGCACTTCAACAGCTTAAGGGATTCCTTGGGATTGTAAAGTTCACAAAGAAAACTGATATTATCTCTGTGATGAAATCAGTGTTTTCATCAGCCCATCATGGATGGAACTGGCAAACTATAGTAATTGGAGCTAGCTTTCTAACTTTTCTTCTGTTAGCCAAACATATTATTGTTGAGATTGTACATTATTTATCTTGTGAATATTTGGATCAGGGCAAGAACAAGAAATTGTTCTGGGTGCCAGCAATCGCCCCATTGATATCAGTTATACTCTCTACATTTCTTGTATACATAACCCGTGCAGACAATAAAGGTGTTGCAATTGTAAAACACATAGATAAAGGAATTAATCCTTCTTCTGTGAAGGAAATTTATTGGAGCGGTGATTACCTCGCCAAAGGTTTTAGAATTGGCATTGTGGCTGGAATGATAGCATTGACTGAAGCCATAGCGATTGGAAGAACATTTGCTTCTAAGAAGGACTATCAGATCGATGGAAACAAAGAAATGGTGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGCTATGTAGCAACTGGTTCATTCTCTCGGTCAGCAGTAAATTTCATGGCTGGCTGTGAAACTGCAGTCTCCAATATTGTCATGTCCATCGTTGTATTTTTAACCCTGCAATTCATCACCCCTCTTTTCAAGTACACTCCACATGCTATTCTTTCTGCTATCATCATTTCTGCTGTCATCAACCTTGTGGACTATCAGGCAGCAATTTTGATATGGAAGATTGATAAATTTGACTTTATTGCTTGCATGGGAGCATTTTTAGGCGTTGTTTTTGCCTCGGTTGAGATAGGACTTTTAATTGCGGTGTCTATATCCTTTGCAAAGATCCTATTGCAAGTCACAAGGCCCCGAACTGCTATTCTTGGGAAGATCCCTAGGACAACTGTGTATAGAAACATTCAACAGTATCCTGAAGCCACTAAGGTTCCTGGTGTACTGATTGTAAGAGTTGATTCTGCAATATACTTTTCCAACTCCAATTATGCTAAAGAAAGGATATTAAGATGGCTGATGGATGAGGAAGAACAAATAAAAGGAGATTACCAAACAAGAATCCAATTTTTGATAGTTGAAATGTCACCCGTTACAGACATCGACACCAGTGGCATCCATGCCCTTGAAGAATTATATAAAAGTCTCCAGAAGCGAGATATTCAGCTTGTTCTGGCAAATCCTGGTTCCGTAGTTATGGACAAGCTCCAGACATCAAACTTTGCTAATTTGCTTGGTGAGGACAATATCTTCCTCACTGTGGCTGAGGCTGTTGCATATTGTTCTCCAAAGCTGGCTGAAGACCCATGA 2001 0.4033 MGHQGDENLETKEMGERSLSISRGQVPYVHKVGVPPRQNLFKEFQATVKETFFSDDPLRSFKDQTKSRKFILGIEAIFPILSWGRNYTFKNFRGDLIAGLTIASLCIPQDIGYAKLANLAPQYGLFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPIANPTDYRRLAFTATFFAGITQATLGAFRLGFLVDFLSHAAIVGFMGGAAITIALQQLKGFLGIVKFTKKTDIISVMKSVFSSAHHGWNWQTIVIGASFLTFLLLAKHIIVEIVHYLSCEYLDQGKNKKLFWVPAIAPLISVILSTFLVYITRADNKGVAIVKHIDKGINPSSVKEIYWSGDYLAKGFRIGIVAGMIALTEAIAIGRTFASKKDYQIDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCETAVSNIVMSIVVFLTLQFITPLFKYTPHAILSAIIISAVINLVDYQAAILIWKIDKFDFIACMGAFLGVVFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYAKERILRWLMDEEEQIKGDYQTRIQFLIVEMSPVTDIDTSGIHALEELYKSLQKRDIQLVLANPGSVVMDKLQTSNFANLLGEDNIFLTVAEAVAYCSPKLAEDP 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0490 666 Gene3D STAS domain 515 662 IPR036513 -
Lal6g0490 666 Pfam Sulfate permease family 92 483 IPR011547 GO:0016021
Lal6g0490 666 PANTHER SULFATE TRANSPORTER 13 666 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal6g0490 666 SUPERFAMILY SpoIIaa-like 537 659 IPR036513 -
Lal6g0490 666 ProSiteProfiles STAS domain profile. 535 658 IPR002645 -
Lal6g0490 666 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 13 666 - -
Lal6g0490 666 TIGRFAM sulP: sulfate permease 79 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lal6g0490 666 Pfam STAS domain 536 654 IPR002645 -
Lal6g0490 666 CDD STAS_SulP_like_sulfate_transporter 536 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0490 Lal-Chr6 3133947 3137592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0490 2 665 Inorganic Solute Cotransporters AT1G22150 74.963 0.0 984
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0490 K17470 - gmx:100797668 1102.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0490 6 3133947 3137592 Lal6g0490 6 3133947 3137592 ECH
Lal18g1143 18 14353709 14358498 Lal6g0490 6 3133947 3137592 LSH
Lal6g0490 6 3133947 3137592 Lal17g0431 17 2911130 2917215 PCT
Lal17g0431 17 2911130 2917215 Lal6g0490 6 3133947 3137592 PCT