Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0464 ATGGCTACCGCCCCTTCCTCGCGCGAAGAGTTCGTATACTTGGCGAAGCTGGCGGAACAGGCCGAGCGCTACGAGGAAATGGTCGACTTCATGGAGAAGGTCTCCGTCGCCGCCGCTGGCAACGAGGAACTCACCGTCGAGGAGCGCAACCTTCTCTCCGTTGCCTACAAGAACGTCATCGGCGCCCGCCGTGCCTCATGGCGCATCATCTCCTCCATCGAGCAGAAGGAAGAGAGCCGAGGCAACGAAGACCATGTCGTCATCATCCGTGACTACAGATCCAAGATCGAGGACGAGCTCTCCAACATCTGCGACGGTATTCTCAAACTCCTTGACTCTCGTCTCATCCCCTCCGCCGCCTCCGGTGACTCCAAGGTCTTTTACCTCAAGATGAAGGGCGATTACCACCGCTACCTCGCCGAGTTCAAGACCGGCACCGAACGGAAGGACGCCGCTGAGAACACTCTCAACGCTTACAAAGCCGCTCAGGATATTGCGAACGGCGAGCTTCCTCCAACTCATCCGATTAGGCTGGGCCTTGCTCTTAACTTTTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATCGCGCTTGCAACCTTGCAAAACAGGCTTTTGACGAGGCTATTGCTGAATTGGATACTCTGGGTGAAGAATCATATAAGGATAGCACTTTGATCATGCAACTACTGCGTGATAACCTCACTCTTTGGACCTCTGACATGCAGGATGATGGTACAGATGAAATCAAAGAAGCAGCAGTTAAGCGCCATGACGAGTAG 783 0.5338 MATAPSSREEFVYLAKLAEQAERYEEMVDFMEKVSVAAAGNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVVIIRDYRSKIEDELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGTERKDAAENTLNAYKAAQDIANGELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGTDEIKEAAVKRHDE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0464 260 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Lal6g0464 260 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Lal6g0464 260 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
Lal6g0464 260 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Lal6g0464 260 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Lal6g0464 260 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
Lal6g0464 260 PIRSF 14-3-3 2 251 IPR000308 -
Lal6g0464 260 ProSitePatterns 14-3-3 proteins signature 2. 221 240 IPR023409 -
Lal6g0464 260 PANTHER 14-3-3 PROTEIN 5 254 IPR000308 -
Lal6g0464 260 Gene3D - 1 252 IPR036815 -
Lal6g0464 260 SUPERFAMILY 14-3-3 protein 7 241 IPR036815 -
Lal6g0464 260 Coils Coil 14 34 - -
Lal6g0464 260 PANTHER 14-3-3-LIKE PROTEIN 16R-RELATED 5 254 - -
Lal6g0464 260 SMART 1433_4 8 252 IPR023410 -
Lal6g0464 260 Pfam 14-3-3 protein 14 239 IPR023410 -
Lal6g0464 260 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0464 Lal-Chr6 2940210 2942443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0464 6 260 14-3-3 family AT1G78300 89.020 1.90e-167 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0464 K06630 - gmx:100529128 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0464 6 2940210 2942443 Lal6g0464 6 2940210 2942443 ECH