Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0448 ATGATGTTGGAATGTGATGCATTTGACGATTCTATCCCCCAACCTGAGTCTGACCAAGATTCCTCCTATCTCAATTTCGATCTCTTCTCTGTCCTCTCCAAACCCAAGGATTATTATAAAATATTGGAAGTGGATTATGATGCTACTGATGATACTATTCGCTCCAATTACATTCGTCTTGCTCTGAAATGGCACCCTGACAAGCAAAAAGGCCATGATTCCGCAACCTCACGCTTTCAAGATATCAACGAGGCCTATCAGGTTTTGAGTGATCCTGTCAAAAGGAGTGAATATGACAAAAATGGAATGCTTTATGTCTATGACTACAATATCATTGATTATCTTAACCGTTACAAGGGCCTTATCTTGACATGCAATGGCCTCGGCATGAAACATTCAATATGGTAA 408 0.3995 MMLECDAFDDSIPQPESDQDSSYLNFDLFSVLSKPKDYYKILEVDYDATDDTIRSNYIRLALKWHPDKQKGHDSATSRFQDINEAYQVLSDPVKRSEYDKNGMLYVYDYNIIDYLNRYKGLILTCNGLGMKHSIW 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0448 135 SUPERFAMILY Chaperone J-domain 32 122 IPR036869 -
Lal6g0448 135 ProSiteProfiles dnaJ domain profile. 37 102 IPR001623 -
Lal6g0448 135 SMART dnaj_3 36 94 IPR001623 -
Lal6g0448 135 Gene3D DnaJ domain 28 112 IPR036869 -
Lal6g0448 135 PRINTS DnaJ domain signature 39 57 IPR001623 -
Lal6g0448 135 PRINTS DnaJ domain signature 57 72 IPR001623 -
Lal6g0448 135 PRINTS DnaJ domain signature 74 94 IPR001623 -
Lal6g0448 135 PRINTS DnaJ domain signature 94 113 IPR001623 -
Lal6g0448 135 CDD DnaJ 37 91 IPR001623 -
Lal6g0448 135 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 14 135 - -
Lal6g0448 135 ProSitePatterns Nt-dnaJ domain signature. 79 98 IPR018253 -
Lal6g0448 135 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 14 135 - -
Lal6g0448 135 Pfam DnaJ domain 37 99 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0448 Lal-Chr6 2835961 2838185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0448 30 99 C2H2 Transcription Factor Family AT1G74250 41.333 4.33e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0448 - - gmx:100804409 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0448 6 2835961 2838185 Lal6g0448 6 2835961 2838185 ECH
Lal22g0421 22 2730864 2733281 Lal6g0448 6 2835961 2838185 LSH