Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0444 ATGGCAAAAAAGTTTGAAACTCATGACACATTCTCGAAGTTTCTTCAACAATACCAACCCCAATCTCACCCTAACCCTAACCCTTTCCAACTCTCCAGAGAATGTGAAACCTCCGAAGATGATGACAGTCGCAGCAGCGGTGGCCCCACTCCGGTTACAACCCAAAAGCCCGCCTCCGCCTCTGCTAGCGGAGGAGATACTGTTGAAGTCTCGCGTAAGCCCAGAGGCCGCCCACCAGGCTCTAAAAATAAGCCCAAGCCGCCTATTATAATCACTCAAGAGCCCGAGCCCGCCATGAGCCCGTATGTTTTAGAAGTCCCTGGTGGAAGCGACGTCGTTGAAGCCTTAACCCGATTCAGTATCAGAAAGAACACGGGCTTATGCGTTCTTACGGGTAATGGAACCGTTGCTAGCGTTACTCTTCGTCAACCTTCTTCTATTACTCCCGGCACCACCGTTACTTTTCGAGGATGCTTTGATATTCTCTCGTTATCCGCTACCATACTCCCTCATCCTTCACCGGTGATTCCTAAAGGTTTTTCTATTTCTCTCGCCGGATCTCAGGGCCAGGTCGTCGGTGGATTTGTCGCTGGACGGTTGCTAGCCGCTGGGACGGTGTTCGTGATTGCCGCTTCTTTCAACAATCCATCTTGTCACAGGCTGGAATCAGAAGAAGATTTAAGAAACAACTCGGTTTCTGGTGGCGGTGATGTGCAGTCGCCGCCTGTGTGTAGCGGTGAAGGCGGCAGAGATAGTGAGCATGAGCGGCACGTGGTGGGTGAGTCTATGTACAGTTGTCACTTGCCTTCTGATGTTATTTGGGCTCCAACGGCAAGACCACCACCACCTTTCTGA 855 0.5135 MAKKFETHDTFSKFLQQYQPQSHPNPNPFQLSRECETSEDDDSRSSGGPTPVTTQKPASASASGGDTVEVSRKPRGRPPGSKNKPKPPIIITQEPEPAMSPYVLEVPGGSDVVEALTRFSIRKNTGLCVLTGNGTVASVTLRQPSSITPGTTVTFRGCFDILSLSATILPHPSPVIPKGFSISLAGSQGQVVGGFVAGRLLAAGTVFVIAASFNNPSCHRLESEEDLRNNSVSGGGDVQSPPVCSGEGGRDSEHERHVVGESMYSCHLPSDVIWAPTARPPPPF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0444 284 MobiDBLite consensus disorder prediction 1 94 - -
Lal6g0444 284 MobiDBLite consensus disorder prediction 44 66 - -
Lal6g0444 284 ProSiteProfiles PPC domain profile profile. 96 235 IPR005175 -
Lal6g0444 284 MobiDBLite consensus disorder prediction 224 255 - -
Lal6g0444 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 283 IPR014476 GO:0003680
Lal6g0444 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 215 IPR005175 -
Lal6g0444 284 Gene3D - 100 233 - -
Lal6g0444 284 CDD DUF296 101 213 IPR005175 -
Lal6g0444 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 19 283 - -
Lal6g0444 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 98 225 - -
Lal6g0444 284 MobiDBLite consensus disorder prediction 11 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0444 Lal-Chr6 2802198 2803052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0444 67 284 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 58.850 1.76e-86 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0444 - - gmx:100811053 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0444 6 2802198 2803052 Lal6g0444 6 2802198 2803052 ECH
Lal18g1179 18 14685799 14686584 Lal6g0444 6 2802198 2803052 LSH
Lal22g0417 22 2703584 2704411 Lal6g0444 6 2802198 2803052 LSH
Lal6g0444 6 2802198 2803052 Lal21g0618 21 4644210 4646551 PCT