Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0431 ATGCTAAGAATCAGAGCTCTACCACCTCCTCCTCCTCCATTTCTAACTCTCACTACGACGATGCTGTCTCCGTCACCGTCGTCTTCCTCCGCCAAATCCGATACCATAATACCCTCTTTCACAACAACTCCCCCTTCTCGAAACCCCATCAACACTTCCTCATTCCGTACTCTTCCTCTTTTCTCAAACTCTCACGTTCAATCTCAAAGCATGTCCCTTTCCAAGTCTTTTTCTAACTCCACCAACCCTATCCCCGTTTCGGGTGTACCCGAATCCGAATCCGATGATGGGTCTAACCCTCTTGTCGTGGTTTCTTTCTACAAGTTCGCGGATTTCCATGACCATGCCCGTTTGCGGAAACCCTTGAAGGAACTCTGCCAACAACTGTTATTTCAAAAGTGTCATATGCATGGTAATGTGTCATTTGTTGATGATTGCACTAACAACCCATCAAGGTTAAACTTGTTAAAAAATTCGACTCTCATAACAACTATCTCAAAACGTGTTTCTGGTGGCATTATTCTTGCACCTGAAGGAATTAATGGAAGCATATGTGGCACTTTGGAGTCGGTGGAGAAAGTTATTTCATTTATACAAAGTGATGATCGTTTGAAGGGGCTAAGACTAGTGGAATCGCCTGTCAGCCCAGAGGAGGAAGCCATCCACCATGGTCATAGTTCCAGTTCTCCTCTGGCTGCTGGGGAAGATGCACCCTTTCGATGGGATCATGTGAGGGTCAAGTTGAAGAAAGAGATTGTGACTCTTGGAATGCCTGATGTATCACCTATTGAGAAGGTTGGAAAGTATGTTGGCCCAAAAGATTGGAATGCTTTGATTACGGACCCAGACACTGAACTTAATATTATCAAACATGTTTGGATTCTTCAGTACATTGAATATTTAAAGCTGCTTCAAGTGGTGATTGATGTGAGGAATAAATATGAAATCAGAATAGGAAAGTTTAAAGGAGCAGTTGATCCTTGCACTCCTTCATTTCGTGAATTCCCAACTTGGGTGGATGAGCATTTCCAGCTTAACAGTACAGATGATGAGCATTCAAACGATGAGGTAGACAATTCAGTCCAAAGTGCTGAAAAGGTGATGGATAATCCTAAACAAAATATGCCGCGTGTTGCAATGTATTGCACTGGAGGTATTCGATGTGAGAAAGCTTCGAGTCTGCTTCTAAGCAAAGGTTTCAAAGAGGTTTATCACCTGGAAGGTGGAATTCTGAAATATCTTGAGGAGGTTCCAGAGACAGAAAGCCTATGGGAGGGTGAGTGCTTTGTTTTTGACAAGCGAGTCTCTGTTGAGCATGGTTTGGTGCCAGGAAACTTCAAGCTCTGCTATGGTTGTAAGCAGCCTGTGAGTGATGCCGACATGGAAGCCCCGGAATATGAATATGGAGTATCTTGCCCTTACTGTTTTTCACAGAAATCAGAGGAGGAGAAAGAGAGGGCTCGAGCTCGACAAAGACAATTCGAGAGATGGGGAATCATCGGCGGTCCAGATAAGGGTCGGCGACCGACAAGCAAACCAGAGAGTGGTAGCCAGAAAGCAAACCAGCTTTCACATTCTGTTTAA 1584 0.4426 MLRIRALPPPPPPFLTLTTTMLSPSPSSSSAKSDTIIPSFTTTPPSRNPINTSSFRTLPLFSNSHVQSQSMSLSKSFSNSTNPIPVSGVPESESDDGSNPLVVVSFYKFADFHDHARLRKPLKELCQQLLFQKCHMHGNVSFVDDCTNNPSRLNLLKNSTLITTISKRVSGGIILAPEGINGSICGTLESVEKVISFIQSDDRLKGLRLVESPVSPEEEAIHHGHSSSSPLAAGEDAPFRWDHVRVKLKKEIVTLGMPDVSPIEKVGKYVGPKDWNALITDPDTELNIIKHVWILQYIEYLKLLQVVIDVRNKYEIRIGKFKGAVDPCTPSFREFPTWVDEHFQLNSTDDEHSNDEVDNSVQSAEKVMDNPKQNMPRVAMYCTGGIRCEKASSLLLSKGFKEVYHLEGGILKYLEEVPETESLWEGECFVFDKRVSVEHGLVPGNFKLCYGCKQPVSDADMEAPEYEYGVSCPYCFSQKSEEEKERARARQRQFERWGIIGGPDKGRRPTSKPESGSQKANQLSHSV 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0431 527 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 98 508 - -
Lal6g0431 527 Gene3D - 254 455 IPR036873 -
Lal6g0431 527 ProSiteProfiles Rhodanese domain profile. 306 422 IPR001763 -
Lal6g0431 527 MobiDBLite consensus disorder prediction 74 96 - -
Lal6g0431 527 Gene3D - 146 253 - -
Lal6g0431 527 MobiDBLite consensus disorder prediction 486 527 - -
Lal6g0431 527 MobiDBLite consensus disorder prediction 74 94 - -
Lal6g0431 527 Pfam Rhodanese-like domain 306 415 IPR001763 -
Lal6g0431 527 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 98 508 IPR020936 -
Lal6g0431 527 MobiDBLite consensus disorder prediction 513 527 - -
Lal6g0431 527 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 252 448 IPR036873 -
Lal6g0431 527 Hamap tRNA uridine(34) hydroxylase [trhO]. 137 459 IPR020936 -
Lal6g0431 527 Pfam UPF0176 acylphosphatase like domain 156 252 IPR040503 -
Lal6g0431 527 MobiDBLite consensus disorder prediction 21 52 - -
Lal6g0431 527 CDD RHOD_YceA 267 415 - -
Lal6g0431 527 SMART rhod_4 296 419 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0431 Lal-Chr6 2721074 2725260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0431 62 521 Sulfurtransferasese or Rhodanese AT2G40760 62.284 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0431 - - gmx:100784854 622.468