Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0426 ATGAAGTTCCAATTCTCTATTCTTGCACTTGTTCTTCTAAGCTTCTTTGGCTTGATTGTAGCTGACTTGAACTCTGACAAACAAGCACTCCTTGAGTTTTCATCTAAAGTTCTACATGCTCCAAGGTTAAACTGGAATGATACAACTCCAATTTGCACTTCATGGGTTGGTGTTATTTGCAATACAAATGGAACAAGTGTCACTGGTATCCATCTTCCAGGTATTGGACTCAAAGGCTCCATTCCAGAGAACAGCATAGGAAAACTAGATTCACTCAGAATCCTTAGCCTTCATTACAATGGCCTTAGAGGAAATCTTCCTTCTGATATTCTCTCCATTCCTTCACTCCAATATGTACTCCTTCAGTACAATAACTTCTCAGGTCCAATCCCTTCTTATGTCTCCCCTAAACTTATTGCATTGGATATTTCCTTTAACTCCTTCACTGGTAGTATTCCACCTACATTTCAGAACTTCAGAAGACTCACTCAGTTGTATCTCCAAAACAACGCCATCTCCGGAGCTATTCCTGAATTCAACCTTCCAAGGCTCAAATCTTTGAATTTGAGCTATAATAACTTAAATGGCTCAATTCCAAATTCCATCAATAAGTTCCCTTATACTTCTTTTGTTGGGAACTCTCTCTTATGTGGACCACCTCTCAATGAGTGTCATGCAAATGGAATCACTCCGTCTCCATCTCCTTCTTCTGTTCATCAACCACTCTCTCCAGATACTACTCAAAATAAAAAGGCTACCACTTCTAAGAAAAGCTTTGGCCTAGGTTCTATACTTTCTCTTGTAATTGGAGGATGTGCTTTCTTCTCTTTCTTAGCTTTAATTGTCTGTATATGCTGTTTGAAGAGGAAAAACAGCAAAACAAGTGGTATACTAAAAGGGAAGGCATCTTGTGCTGGAAAGACTGAGGTTTCAAAGAGTTTTGGGAGTGGTGTGCAAGCTGCTGAGAAGAACAAGTTGTTCTTCTTTGAAGGTTGTTCATATAGCTTTGACCTTGAAGATTTGTTAAAGGCTTCGGCTGAAGTTCTCGGAAAAGGGAGCTATGGAACAACATACAAGGCTTCTTTGGAGGAGGGAACAACAGTGGTAGTTAAAAGGATGAGGGAAGTTGTGGTTGGAAAAAAGGAGTTTGAGCAGCAAATGGAGATTGTGGAAAGAATTGGAAGGCACCCTAATGTCATGCCTCTTAGAGCTTATTACTATTCCAAAGATGAGAAACTTGTAGTTTACAACTACATGACAGGAGGCAGCTTGTTTAACATGTTGCATGGGAACAGGGGTGCAGGAAGAACTCCATTAAACTGGGATTCAAGAATTAAGATTGCAATTGGAGCTGCAAAGGGAATTGCCTTCATCCACTCAGAGGGTGGTTCAAAGTTCACTCATGGCAACATCAAGTCATCCAATGTGCTCGTAACCGAAGAACATGATTGTTGCATCACTGATGTAGGACTAACTCCTCTAATGAACACTCCACCAACAACATTGTCAAGAGCCAACGGTTATCGTGCTCCTGAAGTAACCGAGCCCAAGAAGATCACTCATAAGTCAGATGTATACAGCTTTGGGGTGATCCTTCTTGAAATGCTTACAGGAAAGACTCCATTGGGATATCCTGCATATGACAATGACATGGTTGATCTTCCAAGGTGGGTGAGGTCTGTGGTTCGCGAGGAATGGACAGCTGAAGTTTTTGATGAGGAGTTGCTAAGAGGGCAATATAATGAAGAGGAGATGGTGCAGATGCTTCAGATTGCCCTTGCTTGTGTGGCAAAGTTGGCAGATAATAGACCTACAATGGAGGAAGCTGTTAGAACTATAGAGGAAATTAGGCAGCCCGAGTTGAAGAACCGCACTTCTTCTGAGTCTGAATCTAATGTACAAACACCATGA 1911 0.4134 MKFQFSILALVLLSFFGLIVADLNSDKQALLEFSSKVLHAPRLNWNDTTPICTSWVGVICNTNGTSVTGIHLPGIGLKGSIPENSIGKLDSLRILSLHYNGLRGNLPSDILSIPSLQYVLLQYNNFSGPIPSYVSPKLIALDISFNSFTGSIPPTFQNFRRLTQLYLQNNAISGAIPEFNLPRLKSLNLSYNNLNGSIPNSINKFPYTSFVGNSLLCGPPLNECHANGITPSPSPSSVHQPLSPDTTQNKKATTSKKSFGLGSILSLVIGGCAFFSFLALIVCICCLKRKNSKTSGILKGKASCAGKTEVSKSFGSGVQAAEKNKLFFFEGCSYSFDLEDLLKASAEVLGKGSYGTTYKASLEEGTTVVVKRMREVVVGKKEFEQQMEIVERIGRHPNVMPLRAYYYSKDEKLVVYNYMTGGSLFNMLHGNRGAGRTPLNWDSRIKIAIGAAKGIAFIHSEGGSKFTHGNIKSSNVLVTEEHDCCITDVGLTPLMNTPPTTLSRANGYRAPEVTEPKKITHKSDVYSFGVILLEMLTGKTPLGYPAYDNDMVDLPRWVRSVVREEWTAEVFDEELLRGQYNEEEMVQMLQIALACVAKLADNRPTMEEAVRTIEEIRQPELKNRTSSESESNVQTP 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0426 636 Gene3D Phosphorylase Kinase; domain 1 308 418 - -
Lal6g0426 636 MobiDBLite consensus disorder prediction 228 253 - -
Lal6g0426 636 MobiDBLite consensus disorder prediction 617 636 - -
Lal6g0426 636 SUPERFAMILY L domain-like 40 221 - -
Lal6g0426 636 Pfam Leucine Rich Repeat 137 159 IPR001611 GO:0005515
Lal6g0426 636 Pfam Leucine Rich Repeat 183 204 IPR001611 GO:0005515
Lal6g0426 636 SUPERFAMILY Protein kinase-like (PK-like) 347 613 IPR011009 -
Lal6g0426 636 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Lal6g0426 636 ProSitePatterns Protein kinases ATP-binding region signature. 349 380 IPR017441 GO:0005524
Lal6g0426 636 Pfam Protein kinase domain 347 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0426 636 PANTHER OS05G0588300 PROTEIN 6 635 - -
Lal6g0426 636 Gene3D Ribonuclease Inhibitor 136 226 IPR032675 -
Lal6g0426 636 ProSiteProfiles Protein kinase domain profile. 343 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0426 636 PANTHER RECEPTOR-LIKE KINASE 6 635 - -
Lal6g0426 636 Gene3D Ribonuclease Inhibitor 24 135 IPR032675 -
Lal6g0426 636 Gene3D Transferase(Phosphotransferase) domain 1 419 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0426 Lal-Chr6 2698623 2702846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0426 10 634 Receptor kinase-like Gene Family AT5G58300 58.703 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal6g0426 Pkinase 6.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0426 - - gmx:100775340 948.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0426 6 2698623 2702846 Lal21g0612 21 4619800 4623509 PCT
Lal21g0612 21 4619800 4623509 Lal6g0426 6 2698623 2702846 PCT