Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0403 ATGGGTGAGGGAGAGAGAGCAAAGCCAGAATCAGAAGAAGCAAAAGAAGAAGAAAAGGAAGAAGAAGTTTCATTATTACTTGAGTCTTCTTCAAGATTGAACAATCATGGGTTTCAGATTATGCAATTATCAGAGAAACTCATCAATGCAAACCTCAGCACCAAAATAGAAGCTGCCAGAGAAATCAGAAAACTTGTTCGGAAATCATCTTCTTCTGCTAAAACCCGCTCCAAGTTTGGTGCTTCTGGTGTTATTCAACCTCTTGTTTTTATGCTCTCTTCTTCCAACCTTGATGCTCGTCAATCTTCCCTCCTTGCCCTTCTCAACCTCGCTGTTCGTAATGAACGAGTGAAAGGAAGGAAAACAATTCCAGAGAGTAATGTTTCGTTAGGATCCAATTGCAATGCAAGAAACAAGGTCAAGATAGTGACAGCTGGTGCTGTTCCTCCTCTGGTGGAGCTTCTCAAGATGCAAAATAGCAGTATAAGGGAATTAGCAACAGCGGCAATCTTGACACTCTCAGCTGCTGAACTCAACAAGCCTATTATTGCTGCTTCTGGAGCTGCATCTCTCCTTGTTCAGATTCTCAACTCTGGAAGTGTTCAAGGCAAAGTTGATGCTGTTACAGCCCTCCATAATCTTTCCACCAGCATAGAGAATTCCAACGAACTTCTTGATGCTAGTGCCGTTTCCCCTCTTATCAACCTCCTTAAAGAGTGCAAGAAGTATTCCAAGTTTGCAGAAAAGGCTACATCACTACTCGAAATCCTTTCCAACTCTGAAGAGGGACGAATCACAATCACAGTTGCAGATGGCGGAATCTTAACCTTAGTAGAGACAGTTGAAGATGGATCACTTGTTAGCACTGAGCATGCTGTTGGAACTTTGTTATCCTTATGCCTAAGCTGCCGCGACAAATATCGGGAATTGATTCTTAAAGAAGGAGCAATCCCGGGTCTGTTACGACTGACAGTGGATGGCACAGCTGAAGCTCAAAATCGAGCCCACAGGCTTCTGGATTTGCTCAGAGATTCTCCACCACAAAAAAGAATAACCAACTCAGTTTTTGAGAAAATTGTTAAAGACATTGCTGAACAGGTAGATGGAATAGATAATGCTGCTGAAACTGCCAAAAGGTTATTGCATGATATGGTTCAAAGGAGTATGGAACATAGCATGAACTGCATTCAACATAGTGCTGCATCTTGA 1209 0.4235 MGEGERAKPESEEAKEEEKEEEVSLLLESSSRLNNHGFQIMQLSEKLINANLSTKIEAAREIRKLVRKSSSSAKTRSKFGASGVIQPLVFMLSSSNLDARQSSLLALLNLAVRNERVKGRKTIPESNVSLGSNCNARNKVKIVTAGAVPPLVELLKMQNSSIRELATAAILTLSAAELNKPIIAASGAASLLVQILNSGSVQGKVDAVTALHNLSTSIENSNELLDASAVSPLINLLKECKKYSKFAEKATSLLEILSNSEEGRITITVADGGILTLVETVEDGSLVSTEHAVGTLLSLCLSCRDKYRELILKEGAIPGLLRLTVDGTAEAQNRAHRLLDLLRDSPPQKRITNSVFEKIVKDIAEQVDGIDNAAETAKRLLHDMVQRSMEHSMNCIQHSAAS 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0403 402 Gene3D - 9 127 IPR011989 -
Lal6g0403 402 SUPERFAMILY ARM repeat 43 360 IPR016024 -
Lal6g0403 402 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 228 272 IPR000225 GO:0005515
Lal6g0403 402 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 35 373 - -
Lal6g0403 402 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 187 229 IPR000225 GO:0005515
Lal6g0403 402 MobiDBLite consensus disorder prediction 1 22 - -
Lal6g0403 402 Gene3D - 128 358 IPR011989 -
Lal6g0403 402 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 146 188 IPR000225 GO:0005515
Lal6g0403 402 Pfam Armadillo/beta-catenin-like repeat 135 174 IPR000225 GO:0005515
Lal6g0403 402 PANTHER U BOX DOMAIN-CONTAINING 35 373 - -
Lal6g0403 402 SMART arm_5 134 175 IPR000225 GO:0005515
Lal6g0403 402 SMART arm_5 176 216 IPR000225 GO:0005515
Lal6g0403 402 SMART arm_5 72 112 IPR000225 GO:0005515
Lal6g0403 402 SMART arm_5 260 301 IPR000225 GO:0005515
Lal6g0403 402 SMART arm_5 217 259 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0403 Lal-Chr6 2523382 2526641 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0403 41 344 U-box Gene Family AT3G54790 35.738 1.45e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0403 K08332 - gmx:100785760 521.546