Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0377 ATGTGTGGTATACTTGCTCTCCTTGGTTGCTCTGACACCTCTCAAGCCACAAGGCACCGTGGTCCCGATTGGAGTGGGCTTCATCAACATGGTGATTGTTATTTGGCTCATCAACGGTTGGCCATAGTTGATCCTGCTTCTGGTGATCAACCTCTCTTTAATGAAGACAAATCTGTTGTTGTCACGGTAAATGGAGAGATTTACAACCATGAAGAGCTCAGGAAACAACTGCCGAATCATAAGTTCCGAACTGGAAGTGACTGTGATGTTATTGCTCACCTGTATGAAGAACATGGAGAGAACTTTGTGGATATGCTGGATGGTATCTTTTCATTTGTTCTACTAGATACTCGTGACAACAGTTATATAGTGGCTCGTGATGCTATAGGGGTCACTTCTCTGTACATTGGTTGGGGCTTGGATGGCTCTGTGTGGATTTCATCAGAAATGAAAGGGTTGAATGATGATTGTGAACATTTTGAAGTTTTTCCACCTGGCCACTTGTACTCTAGCAGAGAAAGTGGGTTTCGCAGATGGTACAACCCTCCTTGGTTCTCTCAGGCTATTCCATCAGCCCCTTATGATCCTCTTGCTTTGAGGCATGCCTTTGAGAAGGCTGTGATCAAAAGGTTGATGACTGATGTTCCCTTTGGTGTCCTGCTATCTGGAGGTTTGGACTCTTCCTTGGTTGCGTCCATTACTTCTCGCTACCTCGCAACCACAAAGGCTGCTGAGCAATGGGGATCAAAATTACATTCATTCTGTGTCGGCCTTGAGGGTTCACCAGATCTGAAGGCTGGTAAAGAGGTTGCAGACTATCTAGGGACTGTACACCATGAGTTTCAATACACTGTTCAGGATGGATTAGATGCCATTGAGGATGTTATCTACCATGTGGAAACATATGATGTGACTACAATTCGAGCAAGCACGCCTATGTTTCTAATGTCTCGGAAGATCAAGTCACTTGGTGTCAAATGGGTTATATCTGGTGAAGGATCTGATGAGATCTTTGGAGGGTATTTATACTTCCACAAGGCACCTAACAAGGAAGAGTTTCACCAAGAAACATGCCGCAAGATTAAAGCACTACACCAATATGATTGTCAGCGAGCCAATAAATCAACATTTGCTTGGGGTTTGGAGGCTCGAGTTCCATTTTTGGACAAGGAGTTTATCAATGTTGCAATGAATATTGATCCTGAGCATAAAATGATAAAACGAGATGAAGGAAGGATTGAGAAATGGATTTTGAGGAGGGCTTTTGATGATGAAGAGCATCCTTATCTGCCAAAGCACATTTTGTACAGGCAGAAAGAACAATTCAGTGATGGAGTTGGCTATGGTTGGATTGATGGCCTTAAAGTCCATGCTGCAAAACATAACTCAGCCAGCCTTACTGTTCCTGGAGGACCAAGTGTGGCTTGTAGCACAGCAAAAGCTATTGAGTGGGATGCTGCTTGGTCCAAAAACCTTGATCCATCAGGTAGAGCAGCACTTGGAGTGCACATTTCAGATTATGACAATCAGAATAACCCACTCAACAAAACTGTGGAATTTGAGAAAATTATACCTACTGAAGCTCCTCTTGGAGTTGCCATCCAGGGCTAG 1611 0.4376 MCGILALLGCSDTSQATRHRGPDWSGLHQHGDCYLAHQRLAIVDPASGDQPLFNEDKSVVVTVNGEIYNHEELRKQLPNHKFRTGSDCDVIAHLYEEHGENFVDMLDGIFSFVLLDTRDNSYIVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDCEHFEVFPPGHLYSSRESGFRRWYNPPWFSQAIPSAPYDPLALRHAFEKAVIKRLMTDVPFGVLLSGGLDSSLVASITSRYLATTKAAEQWGSKLHSFCVGLEGSPDLKAGKEVADYLGTVHHEFQYTVQDGLDAIEDVIYHVETYDVTTIRASTPMFLMSRKIKSLGVKWVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHQYDCQRANKSTFAWGLEARVPFLDKEFINVAMNIDPEHKMIKRDEGRIEKWILRRAFDDEEHPYLPKHILYRQKEQFSDGVGYGWIDGLKVHAAKHNSASLTVPGGPSVACSTAKAIEWDAAWSKNLDPSGRAALGVHISDYDNQNNPLNKTVEFEKIIPTEAPLGVAIQG 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0377 536 CDD Asn_Synthase_B_C 200 445 IPR001962 GO:0004066|GO:0006529
Lal6g0377 536 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 461 535 - -
Lal6g0377 536 PANTHER ASPARAGINE SYNTHETASE [GLUTAMINE-HYDROLYZING] 1 461 - -
Lal6g0377 536 Gene3D HUPs 184 467 IPR014729 -
Lal6g0377 536 PIRSF Asn_synthetase_glu-h 345 468 IPR006426 GO:0004066|GO:0006529
Lal6g0377 536 PIRSF Asn_synthetase_glu-h 1 350 IPR006426 GO:0004066|GO:0006529
Lal6g0377 536 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 9 181 IPR029055 -
Lal6g0377 536 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 1 184 IPR029055 -
Lal6g0377 536 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 187 464 - -
Lal6g0377 536 CDD AsnB 2 181 IPR033738 -
Lal6g0377 536 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 174 IPR017932 -
Lal6g0377 536 PANTHER ASPARAGINE SYNTHETASE 1 461 - -
Lal6g0377 536 PANTHER ASPARAGINE SYNTHETASE 461 535 - -
Lal6g0377 536 Pfam Glutamine amidotransferase domain 37 154 IPR017932 -
Lal6g0377 536 Pfam Asparagine synthase 199 350 IPR001962 GO:0004066|GO:0006529
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0377 Lal-Chr6 2418827 2425151 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0377 K01953 - gmx:547894 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0377 6 2418827 2425151 Lal6g0377 6 2418827 2425151 ECH
Lal22g0352 22 2265189 2269707 Lal6g0377 6 2418827 2425151 LSH
Lal3g0693 3 5570397 5576066 Lal6g0377 6 2418827 2425151 PCT
Lal6g0377 6 2418827 2425151 Lal3g0693 3 5570397 5576066 PCT