Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0367 ATGGCAACGGACGCAACAACCAAGTTCAAAAACCTCGATTTCCTTCCCGATTCTCACACTGAAGAATTAACGCCGTCAAGTCACGACGGCCTCCACTTCTGGCAGTTCATGATTTCGGGATCAATCGCTGGTTGCATAGAACACATGGCAATGTTTCCCGTTGACACCGTCAAAACTCACATGCAAGCCATTGGTTCTTGTCCTATCAAATCCGTTACCGTCCGTCAAGCCCTAAATTCTATCCTCAAATCTGAGGGTCCCTCTGCCCTTTACCGCGGCATCGGCGCCATGGGCCTCGGTGCTGGGCCCGCACACGCCGTCTATTTCTCCGTCTATGAAACTTGTAAGAAACGTTTCTCAAATGGGGACCCTAATAATTCGTTGGCGCACGCTGGTTCCGGCGTTTGTGCCACCGTGGCCAGCGACGCGGTGTTTACGCCAATGGATATGGTGAAGCAGCGGTTGCAGCTGAGTAATAGCGGGTATAAGGGGGTTTGGGATTGTGTGAAGAGGGTGATGAATGAGGAAGGGTTTGGGGCGTTTTATGCATCGTATAGGACTACGGTGTTGATGAATGCTCCGTTTACTGCAGTGCATTTTGCCACGTATGAGGCTGCGAAAAAGGGACTCGTCGAGGTTTCGCCGGAGAGCGCTGATGATGAGCGATGGGTTGCTCATGCCACGGCTGGTGCTGCTGCTGGTGCTTTGGCTGCTGCAGTTACAACTCCACTTGATGTGGTTAAAACTCAATTGCAGTGTCAGGGTGTTTGTGGCTGTGATAGATTCAAAAGTGGTTCAATTGGAGATGTTATTAAAACAATTTTGAAAAAGGATGGATACAAAGGGCTCATGAGAGGATGGATTCCAAGAATGCTATTTCATGCTCCTGCAGCTGCAATCTGCTGGTCTACATATGAAGCTGGAAAATCCTTTTTCCAAGATTTTAATCAACAGAAAGACACCGGAACTGTTACTTAA 978 0.4877 MATDATTKFKNLDFLPDSHTEELTPSSHDGLHFWQFMISGSIAGCIEHMAMFPVDTVKTHMQAIGSCPIKSVTVRQALNSILKSEGPSALYRGIGAMGLGAGPAHAVYFSVYETCKKRFSNGDPNNSLAHAGSGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCVKRVMNEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKKGLVEVSPESADDERWVAHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTILKKDGYKGLMRGWIPRMLFHAPAAAICWSTYEAGKSFFQDFNQQKDTGTVT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0367 325 Pfam Mitochondrial carrier protein 221 314 IPR018108 -
Lal6g0367 325 Pfam Mitochondrial carrier protein 127 211 IPR018108 -
Lal6g0367 325 Pfam Mitochondrial carrier protein 31 121 IPR018108 -
Lal6g0367 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 209 IPR018108 -
Lal6g0367 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 221 311 IPR018108 -
Lal6g0367 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 31 118 IPR018108 -
Lal6g0367 325 SUPERFAMILY Mitochondrial carrier 29 306 IPR023395 -
Lal6g0367 325 PANTHER MITOFERRIN-1-RELATED 1 320 - -
Lal6g0367 325 PANTHER MITOCHONDRIAL CARRIER PROTEIN, EXPRESSED 1 320 - -
Lal6g0367 325 Gene3D Mitochondrial carrier domain 133 325 IPR023395 -
Lal6g0367 325 PRINTS Mitochondrial carrier protein signature 36 49 IPR002067 GO:0055085
Lal6g0367 325 PRINTS Mitochondrial carrier protein signature 49 63 IPR002067 GO:0055085
Lal6g0367 325 PRINTS Mitochondrial carrier protein signature 140 158 IPR002067 GO:0055085
Lal6g0367 325 PRINTS Mitochondrial carrier protein signature 182 200 IPR002067 GO:0055085
Lal6g0367 325 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0367 Lal-Chr6 2337820 2343384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0367 1 321 Chloroplast and Mitochondria Gene Families AT1G07030 74.154 5.17e-172 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0367 K15113 - gmx:100802640 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0367 6 2337820 2343384 Lal6g0367 6 2337820 2343384 ECH
Lal18g1259 18 15235501 15238247 Lal6g0367 6 2337820 2343384 LSH