Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0358 ATGGCTTCTAATTTTCAAACATTGCTTGTGCTTGTTATAGTAACTTTGGTCACATTATTAGTGATCCCTGCAAATGCAGAACTCTCTCCTCATTTCTATGACAAAATTTGCCCTCAAGCATTGCCAGCCATAAAATCAGCAGTTTTTCAAGCAATTAAAAAAGAGCAACGCATTGGAGCATCTCTACTTCGCTTGCATTTCCATGACTGCTTTGTTAATGGTTGTGATGGATCAGTTCTACTAGATGACACACCTAGCCTCACTGGTGAGAAGACTGCACTACCAAATATTAATTCAATCAGAGGATTTTCAGTGGTTGATGAAATTAAAGCAGTGGTTGACAAAGCTTGTAAACGCCTCGTGGTATCATGTGCTGATATTTTGGCCATAGCAGCTCGTGATTCTGTTGCCATACTTGGAGGTCCAAAATTTTGGTACCAAGTGTTTTTAGGCAGAAGAGATTCAAGAACTGCAAGCAAGGATGCTGCAAATTCCAATCTTCCTTCTCCAGCATTCAACTTCTCACAGCTTATTTCTAGTTTCAACTCTCATGGACTGAATGTTAGAGACCTTGTAGCACTCTCTGGTGGCCACACCATTGGATTTGCAAGGTGCACTACTTTCAGGAACAGGATTTACAATGAAACAAGACTCATAGACCCAAAGTTTGCAGCATCTTTGAGGAACAAATGTCCCAAAAAGGGTAATGACAACGTTTTAGCACAATTGGATTCAACTGTTGCAAGAGTTGACACCACATACTTTAAGGAATTGCTTCATAAAAAGGGTCTACTTCATTCTGATCAAGAACTATTCAAGGGAAAAGGAAGTGCAAGTGACAACTTGGTGCAACTATATAGCAGAAGCCCTTCAGCTTTTGCTACAGACTTCAAAGCTTCTATGATCAAGATGGGTAATTTGAAGCCTCTAACTGGTAAAAAAGGAGAGATTAGATGCAATTGCCGAAGGATCAATTAG 978 0.3988 MASNFQTLLVLVIVTLVTLLVIPANAELSPHFYDKICPQALPAIKSAVFQAIKKEQRIGASLLRLHFHDCFVNGCDGSVLLDDTPSLTGEKTALPNINSIRGFSVVDEIKAVVDKACKRLVVSCADILAIAARDSVAILGGPKFWYQVFLGRRDSRTASKDAANSNLPSPAFNFSQLISSFNSHGLNVRDLVALSGGHTIGFARCTTFRNRIYNETRLIDPKFAASLRNKCPKKGNDNVLAQLDSTVARVDTTYFKELLHKKGLLHSDQELFKGKGSASDNLVQLYSRSPSAFATDFKASMIKMGNLKPLTGKKGEIRCNCRRIN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0358 325 PANTHER PEROXIDASE 72-RELATED 9 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 Gene3D Peroxidase, domain 2 168 305 - -
Lal6g0358 325 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 CDD secretory_peroxidase 27 324 IPR033905 GO:0004601|GO:0042744
Lal6g0358 325 PANTHER CATIONIC PEROXIDASE 9 324 - -
Lal6g0358 325 Pfam Peroxidase 45 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Lal6g0358 325 ProSiteProfiles Plant heme peroxidase family profile. 27 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 SUPERFAMILY Heme-dependent peroxidases 27 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal6g0358 325 Gene3D - 32 325 - -
Lal6g0358 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0358 Lal-Chr6 2276590 2280025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0358 26 325 Peroxidase AT5G05340 57.756 1.04e-118 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0358 K00430 - gmx:100811396 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0358 6 2276590 2280025 Lal6g0358 6 2276590 2280025 ECH
Lal18g1272 18 15336881 15339298 Lal6g0358 6 2276590 2280025 LSH
Lal22g0328 22 2082437 2085319 Lal6g0358 6 2276590 2280025 LSH