Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0356 ATGTTTGGATGTCCAGAAACAGAAAGATTAGATGAGATAGTAAATAAGGTAAGAGCAGAAGCTGAAGCATCTTGTCCAATGGGAAGGAAGCATTTTTATGGTCCATCTTCTGGGACAACCTTAAACACTGTAACACCTTGTGCTGCGTGTAAGCTTCTGAGAAGGAGGTGTGCTGAAGAATGTCCTTTCTCTCCTTATTTCTCACCACATGAGCCTCAAAAGTTTGCATCTGTTCATAAAGTGTTTGGTGCAAGCAATGTCTCTAAGTTGCTAATGGAGGTACCTGTGGGGCAAAGAGCTGATGCTGCAAATAGCATGGTTTATGAAGCAAATCTGAGGTTGAGAGATCCAGTATATGGATGCACGGGTGCAATTTCAGCTTTGCAGCAACAAGTTCAATCTTTACAAGCTGAACTAAATGCAGTAAGGGATGAGATACTAAAATACAAATATAGAGAAGCTGCAAGTCTTATTTCTTCTCATGCTGTTTTAGTTTCTTCTGGTGAAGCACCAATTTCTATGGATTCATCATCACAAGGTTTTTCTCAACCTCTTCCTCAGTCACCAGCTCCTCCTACTCCGCCAAAACCTTTACCTTCACCTTCTGTTGTCCTTTCATCCTTCTCTTCAACTTCAACTTCTGTGTACATTTCACCTAAAAGCACAATGAGCCATGGATCCGTTTCTAGTGAAAATATTGTTTCATACTTTGTTTAG 717 0.4045 MFGCPETERLDEIVNKVRAEAEASCPMGRKHFYGPSSGTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPQKFASVHKVFGASNVSKLLMEVPVGQRADAANSMVYEANLRLRDPVYGCTGAISALQQQVQSLQAELNAVRDEILKYKYREAASLISSHAVLVSSGEAPISMDSSSQGFSQPLPQSPAPPTPPKPLPSPSVVLSSFSSTSTSVYISPKSTMSHGSVSSENIVSYFV 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0356 238 Coils Coil 125 152 - -
Lal6g0356 238 MobiDBLite consensus disorder prediction 185 201 - -
Lal6g0356 238 ProSiteProfiles LOB domain profile. 45 146 IPR004883 -
Lal6g0356 238 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 29 237 - -
Lal6g0356 238 MobiDBLite consensus disorder prediction 174 203 - -
Lal6g0356 238 PANTHER LOB DOMAIN PROTEIN 29 237 - -
Lal6g0356 238 Pfam Lateral organ boundaries (LOB) domain 46 142 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0356 Lal-Chr6 2262827 2264331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0356 27 159 AS2 family AT2G30340 76.119 1.10e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal6g0356 LOB 6.2e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0356 - - ccaj:109795340 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0356 6 2262827 2264331 Lal6g0356 6 2262827 2264331 ECH