Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0349 ATGGATCTCCTTCTTTTAGAGAAGACCCTACTTGGTCTTTTCATCGCCATCATTGTAGCCATTGTCATTTCTAAGCTCCGGGGGAAGCGCTTTAAACTTCCCCCGGGCCCTTTCCCTGTTCCTATATTCGGCAACTGGCTACAAGTTGGCGATGACTTGAACCACCGTAACCTCACTGATTTCGCTAAGAAATTTGGCCAAATCTTCCTCCTCCGAATGGGACAACGCAACCTCGTCGTTGTTTCATCACCGGAACTCGCCAAAGAGGTTCTCCACACCCAAGGAGTCGAATTCGGGTCCCGTACCCGCAACGTTGTCTTCGACATCTTCACCGGAAAAGGCCAGGACATGGTGTTTACTGTTTACGGAGAGCACTGGAGGAAGATGAGAAGGATCATGACGGTGCCGTTTTTTACGAACAAGGTTGTTCAGCACTACCGGTTAGGGTGGGAGGATGAGGCGGCGCGTGTGGTTGACGATGTTAAACGCAACGCGGAGGCAGCAACTAGTGGAATCGTATTGAGGAGGAGATTGCAGTTGATGATGTATAACAACATGTACAGGATTATGTTTGATAAGAGGTTCGAGATCGAAGAGGATCCGTTGTTCGTGAAGCTTAAGGCTTTGAACGGTGAAAGAAGCCGTTTGGCTCAAAGCTTTGATTATAACTATGGTGATTTTATTCCAATCTTAAGACCCTTTTTAAGAGGCTACTTGAAAATTTGCAAGGAGGTTAAAGAAAAAAGGTTGCAGCTTTTCAAGGATTATTTCGTCGATGAGAGAAAGAAACTTGGAAGCACAAAAAGCATAGATAACGAAGGACTAAAATGCGCCATCGATCACATTTTGGATGCCCAGAAAAAGGGCGAGATCAACGAAGATAACGTCCTTTACATAGTTGAAAACATTAACGTTGCAGCAATTGAAACAACTCTATGGTCAATTGAATGGGGCATTGCTGAGCTTGTGAATCACCCACACATTCAGCAGAAAGTGAGAGAAGAGATTAACAAAGTTCTTGGACCAGGACACCAAGTAACTGAGCCAGATATTCAGAAGCTCCCTTACCTTCAAGCAGTGATCAAAGAGACACTTCGTCTTCGAATGGCGATTCCATTACTCGTCCCACACATGAATCTTCGCGACGCGAAGCTAGGTGGGTTTGACATCCCAGCAGAGAGCAAGGTATTGGTGAATGCATGGTGGCTTGCGAACAACCCTGATCATTGGAAAAAACCTGAGGAGTTTAGGCCTGAAAGGTTCTTAGAGGAAGAGTCCAATGTAGAGGCTAATGGGAATGATTTTAGGTACCTTCCCTTTGGTGTTGGGAGAAGAAGCTGCCCTGGAATTATTCTTGCAATTCCTATACTTGCTATCACTTTGGGACGTTTGGTCCAAAATTTTGAGCTTTTTCCTCCTCCTGGACTATCCAAGCTTGATACCACTGAGAAAGGAGGACAATTTAGTTTGCACATTCTCAAACATTCCACTATTGTGGCTAAACCAATCTCATTCTAG 1518 0.4493 MDLLLLEKTLLGLFIAIIVAIVISKLRGKRFKLPPGPFPVPIFGNWLQVGDDLNHRNLTDFAKKFGQIFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQHYRLGWEDEAARVVDDVKRNAEAATSGIVLRRRLQLMMYNNMYRIMFDKRFEIEEDPLFVKLKALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKICKEVKEKRLQLFKDYFVDERKKLGSTKSIDNEGLKCAIDHILDAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPHIQQKVREEINKVLGPGHQVTEPDIQKLPYLQAVIKETLRLRMAIPLLVPHMNLRDAKLGGFDIPAESKVLVNAWWLANNPDHWKKPEEFRPERFLEEESNVEANGNDFRYLPFGVGRRSCPGIILAIPILAITLGRLVQNFELFPPPGLSKLDTTEKGGQFSLHILKHSTIVAKPISF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0349 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 Pfam Cytochrome P450 34 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 504 - -
Lal6g0349 505 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lal6g0349 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 SUPERFAMILY Cytochrome P450 34 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal6g0349 505 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0349 Lal-Chr6 2206779 2212027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0349 1 502 Monolignol Biosynthesis Gene Families AT2G30490 82.669 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0349 K00487 - rcu:8282005 919.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal6g0349 6 2206779 2212027 Lal6g0349 6 2206779 2212027 ECH
Lal18g1280 18 15395143 15398769 Lal6g0349 6 2206779 2212027 LSH
Lal5g1261 5 15345722 15349189 Lal6g0349 6 2206779 2212027 PCT
Lal6g0349 6 2206779 2212027 Lal5g1261 5 15345722 15349189 PCT