Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0329 ATGGCACCAGTTTCATTACCTCCAGGTTTTAGGTTTCATCCTACTGATGAAGAACTTGTTGCTTATTACCTCAAAAGAAAGATCAATGGTCGTAAAATCGACTTGGAGATCATCCCAGAAGTTGATCTCTATAAGTGTGAACCATGGGACTTGCCAGCCAAGTCATTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTCAGCCCACGTGATAGGAAGTACCCAAATGGATCAAGAACAAATCGTGCTACAAAATGTGGATATTGGAAGGCTACAGGAAAAGATAGGAAAGTGAAGTCATTGAGTGATGATGTGGGAATGAAGAAAACCCTTGTTTACTATCGAGGGAGAGCACCACACGGTTGTCGCACTGGTTGGGTTATGCATGAATATCGTCTTGATCAAAGAGAATGTGAAACTAATTCAGGATTGCAGGAAGCATATGCTCTTTGCCGTATTTTCAAGAAGAGTACAGAAGTGATCCCAAAAGTTGGGGATCAGTATGTTAATGTTACAAGCCATGCAAACCAAATTACGAGCGATCAATCATCAAGCATTGAGCTATACTCTGAAGGACGAGGTGAAGATTTGGATAGTTCAAATTATTTAATGTCCATGGATACATTCTCACCCCACAACATTGGAAATAAGGATCCTCTTAATGTCAATGAAGATCATGGGACTTGGTCACAGTACTTATCAGATGACCCATTATTCAGTCTTCCCACTTCTTCATTTCCTAATTATGGTGTCATATCATACCCTCCATCCAAGGTGGATGTAGCGCTAGAGTGTGCAAGGATGCAGCATAGGTTTGTCATGCCTCCATTGGAGGTGACGAAGGAATTCCCTCAAGTTGGAACCTCTGAGCAGAAGAATATGACACAAGCCATGCATGGAATCGGAAATGAAAGAGATACAGTGCAAGAAATTCTTTCAGTTGCTCATGCTTCTCAGGAATTGATAAATAACCAGTCCATCTACTCACAGGGATGGAGTAGGAATAATGAAACGTATGCTCCTCGTGAAGATGATTTCACTTTCATGATTGGCACTAATTGCAATCATTTAAACGAATTGAACTGTATGAATACACATGTTGGAGATCCAAACAAAAGATCGATAGAGATCGGAGATCTGGATGAAGAATTTAAGGCTGAGAGGATGGTTGAGAACTTAAGATGGGTTGGAATGTCAAAAGAAGATTTGGAAAAGAGCTTTATGGAAGACCAAAAGATTGTTTCCATCCAGGATATTTCAAGCTTTCAATCAAACAGGAAAGAGAATGAGATGCAAGAATCTGGTCAACACAATAGCAACAAGGAACTCGATGACCCTTACATCAATTATTACTCATTTGGCTTCAACAATGATGATGACACAAACAAGAACTATATAGAAGATGGTAACATGGAAGATTATTCAAGCTCTCCAAGCTTTGAGGTCGTTGAAGAAATAAAGATCAATCATGGAATGTTTATTTCCACAGGTCAAGTAGCTGAGACATTCTTTCACCAACTAGTTCCTTCTCAAACTCTCCAAGTTCACCTCAATCCAGTGATGGCAAACAATCAATACTCAATAAAGAATAATGAAGAGACACTAGTGATGACAATGGAGAACCATGGGTCTTTCTTTAAGGAATTTAAGGCCTATGTGGCAGGGAAGCTAATAAAGGCATCAAAGACAATAGCAAGTATCATTGTATTCATCTTTGCACTTCTTTTGATGAATTATGTTTATTTGAAGGAAGAATTGAAAGCAAAATGCTGCTATAGTGGTACCAGCATGAAGAGAAGAAAGCAATCATCTGAGATTATCAAGTGGAATGAATCAGAAAAGGTTTGGTTTGTTGGTATAAAAAGTAAGAAAGTAATATTTAGTGCAGTCTTGAAGAAAATAAGCATTTTCCTTACCATATTTTTGCTCTTTGTGCCATGTGGGCTAACCTAG 1953 0.3876 MAPVSLPPGFRFHPTDEELVAYYLKRKINGRKIDLEIIPEVDLYKCEPWDLPAKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKCGYWKATGKDRKVKSLSDDVGMKKTLVYYRGRAPHGCRTGWVMHEYRLDQRECETNSGLQEAYALCRIFKKSTEVIPKVGDQYVNVTSHANQITSDQSSSIELYSEGRGEDLDSSNYLMSMDTFSPHNIGNKDPLNVNEDHGTWSQYLSDDPLFSLPTSSFPNYGVISYPPSKVDVALECARMQHRFVMPPLEVTKEFPQVGTSEQKNMTQAMHGIGNERDTVQEILSVAHASQELINNQSIYSQGWSRNNETYAPREDDFTFMIGTNCNHLNELNCMNTHVGDPNKRSIEIGDLDEEFKAERMVENLRWVGMSKEDLEKSFMEDQKIVSIQDISSFQSNRKENEMQESGQHNSNKELDDPYINYYSFGFNNDDDTNKNYIEDGNMEDYSSSPSFEVVEEIKINHGMFISTGQVAETFFHQLVPSQTLQVHLNPVMANNQYSIKNNEETLVMTMENHGSFFKEFKAYVAGKLIKASKTIASIIVFIFALLLMNYVYLKEELKAKCCYSGTSMKRRKQSSEIIKWNESEKVWFVGIKSKKVIFSAVLKKISIFLTIFLLFVPCGLT 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0329 650 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 360 - -
Lal6g0329 650 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 360 - -
Lal6g0329 650 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Lal6g0329 650 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Lal6g0329 650 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Lal6g0329 650 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0329 Lal-Chr6 2103704 2108613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0329 1 600 NAC Transcription Factor Family AT1G65910 44.935 8.33e-163 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal6g0329 NAM 3.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0329 - - gmx:100809019 842.032