Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0323 ATGTCGCTACTTTCTTTCACCCTTCTCCTTTTCTTCTTCTTTATCAATGATGTAACTGTAACCGCAACAACCGAGTTTGACTTTGGAACCTTAACCTTAAGCAGCCTCAAGCTTCTCGGCGATGCCCACTTGAACAATGGCACCGTCAGCCTCACCCGCGACCTCGCCGTACCAAACTCCGATGCCGGTAGAGCTTTATATTCCCGCCCGATCATATTCCGGCAATCCGGAGCCCATTCTCCGGCGAGTTTTACCACCTTCTTCTCCTTCTCCGTCATCAACCTCAACCCCTCCTCCATCGGCGGCGGTCTCGCTTTCCTCTTATCGCCGGACGACGACTCCATGGGAGATGCCGGCGGTTTTCTCGGTCTCGGCGGCGGCGGCAGTTTTGTCGCAGTGGAGTTTGATACTCTCATGGATGAGGAATTCGAAGACATTAACGGAAACCATGTTGGGGTGAACCTTAACACAATGGTTTCAACGCAAGTTTGTGACTTGGGTGAAATTGGAATCGATCTCAAAAGTGGGGACACGGTTAATGCGTGGATCGACTTTGATGGATCCAACAAAGGGTTAAGCGTGTGGGTTTCGTACTCGAATCTGAAACCGAAAGAACCGGTTTTGACTTTGAATCTCGATGTCGATCGGTTTTTCAATGATTTTATGTATGTGGGGTTCTCTGGTTCAACACAAGGAAGCACGGAAGTTCATAGTGTTGAGTGGTGGAGCTTCAGTTCTTCTTTTGACTCATCGGGTGCGTCACCGCCACCTCCGGCAATGAGTTTGATGAACACGACTGCTAGTTCAATTAAGTCGCCGCCGCCATCGTTGGCACCTTCAGCTTCGTCCAATGGTCAACAAAAGGAGAATAAGTCTTCTTGCCACAATGGGTTATGCAAACAAGGTTTGGGTGCAGTTGCTGGAGTTGTAACTGCTGGTGCTTTTGTTTTGGCTCTATTTGCTGGTGCAATGATTTGGGTTTATTCTAAAAAGTTTAAGCATGTGAAGAAGATGGATTCATTAGGATTAGAGGTTATGAAAATGCCTAAACAGTTTAGTTACAAGGAGCTTAAAGCAGCTACTAAGTGTTTCAAGGCCAATAGGATAATTGGTCATGGTGCATTTGGGACTGTGTATAAGGGCATTTTGCCTGAAAATGGGGACATTGTTGCGGTTAAGAGATGTAGCCATAGTGGTCAGGGTAAGAATGAGTTTTTGTCTGAGTTATCCATAATTGGGACCCTTAGACATCGGAATCTTGTTCGCCTTCAAGGTTGGTGTCATGAGAAAGGCGAGATTTTATTGGTGTATGACTTGATGCCTAATGGAAGTTTAGATAAGGCTTTGTTCGAGACAAGAACACCTCTGCCTTGGCCTCACAGGCGTAAGATTTTGTTAGGTGTCGCATCAGCGTTGGCCTACTTGCATCAGGAATGTGAGAATCAGGTAATTCATAGAGACATTAAGACTAGTAACATAATGTTGGATGAAGGATTCAATGCTAAATTGGGCGATTTTGGTTTGGCGAGGCAAACCGAGCATGACAAGTCTCCAGATGCCACAGTGGCTGCCGGAACAATGGGGTACCTGGCACCTGAATATCTCCTTACGGGTAAAGCTACAGAGAAAACTGATGTGTTTAGTTATGGTGCCGTGGTTCTTGAGGTGGCTAGTGGGAGAAGACCTATAGAGAATGATGCCACTGGGATTGGTAAAGTTGGGGTTTGCTGCAATTTGGTAGAATGGGTTTGGAGTTTGCACCGTGAAGGGAGGTTGCTAACAGCAGCTGATCAAAGGTTGGAGGGACAGTTTGACGAGGAGGAAATGACAAGGTTATTGTTGGTTGGGCTAGCTTGCTCCCACCCTGACCCATTGGCTAGACCCACTATGAGGAGTGTGTTTCAGATGCTGGTCGGCGAGGCTGAAGTGCCTGTTGTCCCAAGAACTAAGCCATCTACAGGTTTTGGTACTTCTCATTCTCACCTATTACTGAGCTTGCAAGATAGTGTATCTGACTGTGATGGTGTAATCACCATCTCTACCTCCTCATCAGAGAACAATTTTAATGGCGGAGATATAGTATGA 2085 0.4652 MSLLSFTLLLFFFFINDVTVTATTEFDFGTLTLSSLKLLGDAHLNNGTVSLTRDLAVPNSDAGRALYSRPIIFRQSGAHSPASFTTFFSFSVINLNPSSIGGGLAFLLSPDDDSMGDAGGFLGLGGGGSFVAVEFDTLMDEEFEDINGNHVGVNLNTMVSTQVCDLGEIGIDLKSGDTVNAWIDFDGSNKGLSVWVSYSNLKPKEPVLTLNLDVDRFFNDFMYVGFSGSTQGSTEVHSVEWWSFSSSFDSSGASPPPPAMSLMNTTASSIKSPPPSLAPSASSNGQQKENKSSCHNGLCKQGLGAVAGVVTAGAFVLALFAGAMIWVYSKKFKHVKKMDSLGLEVMKMPKQFSYKELKAATKCFKANRIIGHGAFGTVYKGILPENGDIVAVKRCSHSGQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFETRTPLPWPHRRKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNAKLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIENDATGIGKVGVCCNLVEWVWSLHREGRLLTAADQRLEGQFDEEEMTRLLLVGLACSHPDPLARPTMRSVFQMLVGEAEVPVVPRTKPSTGFGTSHSHLLLSLQDSVSDCDGVITISTSSSENNFNGGDIV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0323 694 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 250 IPR013320 -
Lal6g0323 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Lal6g0323 694 CDD STKc_IRAK 370 637 - -
Lal6g0323 694 SMART serkin_6 364 637 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0323 694 PANTHER - 16 688 - -
Lal6g0323 694 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524
Lal6g0323 694 Gene3D Transferase(Phosphotransferase) domain 1 440 657 - -
Lal6g0323 694 Gene3D - 22 256 - -
Lal6g0323 694 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 16 688 - -
Lal6g0323 694 MobiDBLite consensus disorder prediction 255 294 - -
Lal6g0323 694 Pfam Legume lectin domain 25 250 IPR001220 GO:0030246
Lal6g0323 694 Pfam Protein kinase domain 365 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0323 694 CDD lectin_legume_LecRK_Arcelin_ConA 40 242 IPR001220 GO:0030246
Lal6g0323 694 ProSiteProfiles Protein kinase domain profile. 364 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0323 694 SUPERFAMILY Protein kinase-like (PK-like) 347 655 IPR011009 -
Lal6g0323 694 Gene3D Phosphorylase Kinase; domain 1 326 439 - -
Lal6g0323 694 ProSitePatterns Legume lectins beta-chain signature. 131 137 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0323 Lal-Chr6 2080229 2082313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0323 1 676 Receptor kinase-like Gene Family AT3G53380 69.697 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal6g0323 Pkinase 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0323 - - lang:109356779 1099.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1304 18 15569780 15571876 Lal6g0323 6 2080229 2082313 LSH
Lal22g0297 22 1885891 1888005 Lal6g0323 6 2080229 2082313 LSH
Lal3g0508 3 3642325 3644379 Lal6g0323 6 2080229 2082313 PCT
Lal6g0323 6 2080229 2082313 Lal3g0508 3 3642325 3644379 PCT