Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0316 ATGAGCCATGGACATGACAACCCGTTGTTTCAGATACGTGGGTCCCACTTGCATGTGCGTTTCCTCTTCTTCCATTTTTCACCATTTCACTCTCTGCTATGTATCACCATTTTCATTACTCTCTCTTTCACAATATTGAAAAACAAACAACACCAAAACATCATGAACAAGTTCAAGTTCGATTCTTTTTTCATTTTCCTATCTGGGTTTCTCTCCATAACTGTTCTCTTAGTTAACTCCCAAAACGACGACGCTTCAGTAATGCTATCTCTCAAAAAGACTCTGAACCCACCCGAATCTCTCGGATGGACCGACCCGAACCCATGCAACTGGGTTCATGTCACTTGCTCCGATGAGAAACGGGTAACTCGGATCCAAATCGGGCGCATGAACCTCCAAGGCACTCTCCCCTTCAACCTTCAAAAGCTGACACAGTTGCAGCACTTGGAGCTCCAATACAATAACTTTTCGGGTCCCATACCCGACTTAAATGGGTTAACTTCGCTCCAAGTCTTCATGGGTAGTAACAACCGCTTCACTTCAATCCCAACCTCTTTCTTCAACGGCATGTCTCAGCTTCAAGCTGTGGAAATTGATAACAACCCTTTTGAAGAGTGGGAGATACCTCTTAGTCTTCAAAACGCTTCTTCACTTCAGAACTTCTCAGCTAACTCTGCTAATGTTAGAGGCAAGTTACCTGATTTCTTTGGCTCTGATGTTTTTCCAGGTTTGACCCATTTGCATTTAGCATTTAACAAAATTGAAGGAACTCTGCCTTTAAGCTTTTCTGGGTCACAGATTGAGACCCTTTGGTTGAATGGCCAAAAGGGTGATGCTGATGCTAAACTTGGTGGCACTGTTGAGGTTTTGAAGAACATGACCTTTTTGAGTGAGGTTTGGTTGCAATCAAATGGTTTCACTGGTCCTTTACCAGATTTTTCAGGGTTGAAAAGCTTGCAAGTTTTGAGCTTGAGGGATAATAGTTTCACCGGCCCGGTTCCGAGTTCACTGTTGAGTCTTAAGTCTTTGAAAGTTGTTAACTTGACTAATAACTTTCTTCAGGGTCCAATGCCAGTGTTTGGTACTGATGTAGAGGTTGATATGAGGAAGGATTCAAATAGCTTTTGCCTTCCTGGTCCTGGTGAATGTGATCCCAGGGTTCAGGTTTTGCTTTCTGTTGTTGGACTTTTTGGTTATCCTCAAAGGTTTGCTGAGAATTGGAAGGGGAATGATCCTTGTAATGATTGGATTGGGATTACTTGCAGTGATGGGAATGTTACTGTTGTTAATTTTGAGAAGATGGGGCTTACTGGTGTGATATCGCCGGAGTTTGCCAAGCTCAAATCACTGCAAAGACTTGTGCTTGCTGATAACAATCTCACTGGTCCAATTCCGGGGGAACTTACTACTTTGCCTGTGCTTACTCAATTGAATGTCGCAAACAATAAACTTTTCGGGAAAAAGCCAAGTTTTAGGAGTAATGTGATTGTTGACACTAGTGGTAACAAGGATATAGGGAAGGATAAAAGCAGTTTGACCCCTCAAGGTCCAATGTCTTCAGCAGTTCCTAGTGCGAGGGGAGAAAATGGCGGGAGTTCTGAAAATGGTGGCAAAAAGTCTTCTTCCCATGTTGGAGTGATTGTTTTTGCTGTAGTTGGGGCTGTATTTGTGGTTGCCTTGATTGGTCTCTTAGTTTTCTGCTTGCTTAGGATGAAGCAGAAGCAGTTACGCAGGGTCCAAAGCCCAAATACACTAGTCATTCACCCTCTTCATTCTGGTTCAGATAATGAAGGTGTGAAGATTACGGTTGCAGGTTCAAGTGTGAGTGTTGGTGGTGTCAGTGAGAATCAAACCATGGGTGGCAGTGAGGCAGGAGATATACAAATGGTTGAAGCAGGAAATATGGTCATTTCCATACAAGTCCTGAGGAATGTCACTGACAATTTCAGTGAGAAGAATATATTGGGACAAGGAGGTTTTGGAACTGTTTATAAAGGTGAACTGCATGATGGTACAAGAATTGCAGTGAAAAGAATGGAGTGTAGCATAATAACTGGCAAAGGTGCAACAGAATTTAAGTCTGAAATAGCTGTTTTGACGAAGGTTCGCCACCGACATCTTGTTGCTCTTCTTGGCTATTGCTTGGATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGAGCACTAAGCAGTCATCTTTTTAACTGGTCAGAAGAAGGGCTGAAACCATTGGAATGGACTAGAAGATTGACCATTGCCTTGGATGTAGCAAGGGGTGTTGAGTACCTCCATGGCTTGGCCCATCAAAGCTTCATACACAGAGACTTGAAACCTTCAAACATTCTCCTTGGAGATGATATGAGGGCAAAAGTTGCAGATTTTGGTCTGGTGCGCCTTGCTCCAGAAGGCAAAGCTTCTATAGAAACTAGAATTGCAGGAACTTTTGGATATTTGGCACCGGAATATGCAGTTACGGGTCGTGTGACAACTAAAGTTGATGTGTTCAGCTTTGGTGTAATACTGATGGAAGTGATAACCGGAAGAAAAGCACTTGATGATACCCAACCAGAGGATAGCATGCACCTTGTAACTTGGTTCCGTCGAATGTACATACACAAAGATTCATTCCGCAAGGCCATTGATCCCACACTTGAGCTCAATGAGGAAACACTTGCTAGCATTCACACGGTAGCTGAGTTAGCTGGCCACTGTTGTGCCAGGGAACCATATCAAAGACCTGACATGGGTCATGCTGTTAATGTGCTTTCCTCACTTGTAGAACTTTGGAAACCATCTGATCATAGTTCTGAAGATATATATGGTATTGACCTAGACATGTCGTTACCGCAAGCACTTAAAAAATGGCAGGCTTATGAAGGTGGAAGTCATATGGAGTATTCTTCATCTTCAATTCTTCCAAGCTTGGATAACACACAAACAAGTATACCTACGCGCCCATATGGATTTGCGGATTCTTTCACATCAGTAGATGGTAGATGA 3009 0.4304 MSHGHDNPLFQIRGSHLHVRFLFFHFSPFHSLLCITIFITLSFTILKNKQHQNIMNKFKFDSFFIFLSGFLSITVLLVNSQNDDASVMLSLKKTLNPPESLGWTDPNPCNWVHVTCSDEKRVTRIQIGRMNLQGTLPFNLQKLTQLQHLELQYNNFSGPIPDLNGLTSLQVFMGSNNRFTSIPTSFFNGMSQLQAVEIDNNPFEEWEIPLSLQNASSLQNFSANSANVRGKLPDFFGSDVFPGLTHLHLAFNKIEGTLPLSFSGSQIETLWLNGQKGDADAKLGGTVEVLKNMTFLSEVWLQSNGFTGPLPDFSGLKSLQVLSLRDNSFTGPVPSSLLSLKSLKVVNLTNNFLQGPMPVFGTDVEVDMRKDSNSFCLPGPGECDPRVQVLLSVVGLFGYPQRFAENWKGNDPCNDWIGITCSDGNVTVVNFEKMGLTGVISPEFAKLKSLQRLVLADNNLTGPIPGELTTLPVLTQLNVANNKLFGKKPSFRSNVIVDTSGNKDIGKDKSSLTPQGPMSSAVPSARGENGGSSENGGKKSSSHVGVIVFAVVGAVFVVALIGLLVFCLLRMKQKQLRRVQSPNTLVIHPLHSGSDNEGVKITVAGSSVSVGGVSENQTMGGSEAGDIQMVEAGNMVISIQVLRNVTDNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMECSIITGKGATEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGALSSHLFNWSEEGLKPLEWTRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMEVITGRKALDDTQPEDSMHLVTWFRRMYIHKDSFRKAIDPTLELNEETLASIHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDHSSEDIYGIDLDMSLPQALKKWQAYEGGSHMEYSSSSILPSLDNTQTSIPTRPYGFADSFTSVDGR 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0316 1002 PANTHER OSJNBA0070M12.3 PROTEIN 66 1002 - -
Lal6g0316 1002 SMART serkin_6 649 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0316 1002 MobiDBLite consensus disorder prediction 502 540 - -
Lal6g0316 1002 SUPERFAMILY L domain-like 98 491 - -
Lal6g0316 1002 SMART LRR_typ_2 447 471 IPR003591 -
Lal6g0316 1002 SMART LRR_typ_2 241 264 IPR003591 -
Lal6g0316 1002 SMART LRR_typ_2 316 340 IPR003591 -
Lal6g0316 1002 SMART LRR_typ_2 166 189 IPR003591 -
Lal6g0316 1002 Gene3D Ribonuclease Inhibitor 81 383 IPR032675 -
Lal6g0316 1002 ProSitePatterns Serine/Threonine protein kinases active-site signature. 774 786 IPR008271 GO:0004672|GO:0006468
Lal6g0316 1002 Pfam Leucine rich repeat N-terminal domain 387 422 IPR013210 -
Lal6g0316 1002 Pfam Leucine rich repeat N-terminal domain 82 117 IPR013210 -
Lal6g0316 1002 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
Lal6g0316 1002 PANTHER RECEPTOR PROTEIN KINASE TMK1 66 1002 - -
Lal6g0316 1002 Gene3D Transferase(Phosphotransferase) domain 1 727 944 - -
Lal6g0316 1002 SUPERFAMILY Protein kinase-like (PK-like) 627 933 IPR011009 -
Lal6g0316 1002 CDD STKc_IRAK 655 928 - -
Lal6g0316 1002 Gene3D Ribonuclease Inhibitor 385 509 IPR032675 -
Lal6g0316 1002 Pfam Protein kinase domain 650 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0316 1002 ProSiteProfiles Protein kinase domain profile. 649 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0316 1002 Gene3D Phosphorylase Kinase; domain 1 610 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0316 Lal-Chr6 2030097 2034228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0316 131 931 Receptor kinase-like Gene Family AT5G07280 31.098 7.60e-81 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lal6g0316 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0316 - K00924 aprc:113846741 1523.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal22g0292 22 1848324 1852208 Lal6g0316 6 2030097 2034228 LSH