Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0306 ATGAACTCTTTTCTCTCTCTCCTTTTCTTCCTATTCGCCATTGCCGCCGCCGAAGATATAGCTTCCGACAGAGCCGCTCTATTAGCCCTACGCTCCGCCGTGGGTGGCCGTTCACTCCTCTGGAACCTCACCCAAACAAATCCTTGTTCATGGAGCGGTGTCTTCTGCAACGGAAACCGGGTCACAACGTTGCGGTTTCCAGGTATGGATCTCTCTGGGACCCTTCCTTTGGGTTTAGGGAACCTTACTAAGTTGGAAATTCTCTCTCTCCGGTTCAACGCGCTAAACGGGACAATTCCCTCGGATTTCGCCAACCTTGTTAACTTGAGGCACCTTTATCTTCATGGTAACTTCTTCTCTGGTGAAATTCCTGATTTTGTGTTCAATTTGAAGAATTTGGTGAGGTTGAATTTGGGCAGTAACAATTTCAGTGGTGAGATATCACCAAAGTTCAATAACCTCACTCGTTTGAGTACCCTCCTTTTGGGTAATAATCATTTCACTGGGTCAATTCCTGAACTTAATGTTCCACCTCTTCAGCAGTTCAATGTTTCAAATAATCTCTTAAATGGGTCTATTCCTGAGAGGTTTTCACGTTTGGATAAAAGTGCTTTTTCTGGGAATTCACTTTGTGGAAAGCCCTTGCAACCTTGCCCTGGAACTGAGGGTGGAAAAAAGAAATTATCTGGTAGCGCAATTGCGGGAATTGTGATTGGTTCTTTGTTTGGTGTGCTGTTGGTTCTGTTGATTTTGTTCTTAATGTGTAGAAAAAAGAGAGGTATAATTGATTCCAGTGGTGCTGCGCCTGCTAAGCAGGTTGAAGCTGTTGCGCCTGGAGAGAAGAGTGGTAATGATAGTGAGAATAATGGTAGTGATGGTAATTCAGCTGTTGCAGCAGCAAAAGTTGATGGTAAGAATGGTAAGAGTTTGGTGTTTTATGGGAATGTGAATAAGCCCTTTGATCTAGAGGACTTGCTGAGGGCTTCAGCTGAAGTGTTAGGGAAGGGGACTTTTGGAACCACTTATAAGGCTACCATAGATATGGGAATGAGCGTGGTTGTGAAGAGGTTGAGAGATGTTACTGCACCAGAAAATGAATTCAAAGAGAAAATTGAGCAAGTGGGAAAGATGGTTCATGAGAACGTGGTCCCACTCAGGGGTCATTATATTAGCTGGGATGAAAAGCTTTTGGTGTATGATTACATGCCTATGGGAAGCTTATCTGCCCTCTTACATGCAAATAATGGAGCTGGCAGGAGTCCACTGAATTGGGAAAGAAGGACTGGCATTGCCCTTGGTGCTGCTCGTGGGACTGCATACCTACATTCACATGGCCCGGCATCCTCCCATGGAAATATCAAGTCATCAAATATACTTCTAACCGAATCTTACGAAGCTCGTGTCTCTGACTTCGGCCTTCCTTATCTTGCACTCCCAACCTGTACACCTAATCAAATCTCTGGTTACAGTGCCCCTGAGGTAACAGATGCTCACAAAATATCTCAAAAAGCAGATGTCTATAGCTTTGGCATAATGCTTTTGGAGCTACTTACCAGGAAGGCTCCTAGTTATTCTTCACTTGATGAAGAAGGGGTAGACCTCCCAAGATGGGTACAATCTGCGGTTCAGAAGGAACAGAACAATGAAATATTTGACGTAGAGCTTCTCAGATACCAGAATGTTAAGGAGGAAATGCTGAAGCTATTGCAGCTTGCACTTGAATGTACTGCTGAATATCCTGAGAAGAGACCTTCCATGGATGTGGTGGCAAGCAAGATTCAAGAAATATGTAATTCCAGCATTGAAAAAGAGGGAGTTTCACAACAGTACTATTCTGCTGACTTGAATGCGCTGCAAGCTTGA 1863 0.4407 MNSFLSLLFFLFAIAAAEDIASDRAALLALRSAVGGRSLLWNLTQTNPCSWSGVFCNGNRVTTLRFPGMDLSGTLPLGLGNLTKLEILSLRFNALNGTIPSDFANLVNLRHLYLHGNFFSGEIPDFVFNLKNLVRLNLGSNNFSGEISPKFNNLTRLSTLLLGNNHFTGSIPELNVPPLQQFNVSNNLLNGSIPERFSRLDKSAFSGNSLCGKPLQPCPGTEGGKKKLSGSAIAGIVIGSLFGVLLVLLILFLMCRKKRGIIDSSGAAPAKQVEAVAPGEKSGNDSENNGSDGNSAVAAAKVDGKNGKSLVFYGNVNKPFDLEDLLRASAEVLGKGTFGTTYKATIDMGMSVVVKRLRDVTAPENEFKEKIEQVGKMVHENVVPLRGHYISWDEKLLVYDYMPMGSLSALLHANNGAGRSPLNWERRTGIALGAARGTAYLHSHGPASSHGNIKSSNILLTESYEARVSDFGLPYLALPTCTPNQISGYSAPEVTDAHKISQKADVYSFGIMLLELLTRKAPSYSSLDEEGVDLPRWVQSAVQKEQNNEIFDVELLRYQNVKEEMLKLLQLALECTAEYPEKRPSMDVVASKIQEICNSSIEKEGVSQQYYSADLNALQA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0306 620 SUPERFAMILY L domain-like 41 202 - -
Lal6g0306 620 Pfam Protein tyrosine and serine/threonine kinase 331 592 IPR001245 GO:0004672|GO:0006468
Lal6g0306 620 Gene3D Ribonuclease Inhibitor 176 222 IPR032675 -
Lal6g0306 620 SUPERFAMILY Protein kinase-like (PK-like) 331 590 IPR011009 -
Lal6g0306 620 PANTHER INACTIVE RECEPTOR KINASE-RELATED 6 602 - -
Lal6g0306 620 Gene3D Phosphorylase Kinase; domain 1 294 401 - -
Lal6g0306 620 ProSiteProfiles Protein kinase domain profile. 327 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal6g0306 620 PANTHER OS05G0588300 PROTEIN 6 602 - -
Lal6g0306 620 MobiDBLite consensus disorder prediction 272 297 - -
Lal6g0306 620 Pfam Leucine rich repeat N-terminal domain 21 57 IPR013210 -
Lal6g0306 620 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Lal6g0306 620 Gene3D Ribonuclease Inhibitor 20 175 IPR032675 -
Lal6g0306 620 Gene3D Transferase(Phosphotransferase) domain 1 402 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0306 Lal-Chr6 1961180 1964723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0306 17 596 Receptor kinase-like Gene Family AT1G48480 56.840 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lal6g0306 PK_Tyr_Ser-Thr 1.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0306 - - aprc:113846223 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal18g1308 18 15605116 15608217 Lal6g0306 6 1961180 1964723 LSH
Lal22g0283 22 1797929 1801162 Lal6g0306 6 1961180 1964723 LSH