Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal6g0296 ATGTGGGAGTTAGGAGAAGGAAGGAAAGATATGTGTGGGAATGGGATGGATGAGTTACTTGAAGTTCTTGGTTATAAGGTGCGTTCATCAGACATGGAAGACGTGGCACATAAATTAGAGCAACTAGAAGATGTGATTGTTACTAATCAACAAAACGGGATTTCTCATCATCACACCGTTCATTACAACCCAACTGATCTACACGGCTGGGTTCACAACATGCTTAACCAAATCGATAATAGTAACAACAACGACGTCGTTCCCTCACAAGGAGTTTACAATGACGATTCTGACCTTAGAATAATAACCGGTGTAGCTTCCTTCCCACCACCAAACGGAGAAGGTGGAAATGCTAATACTCCAAACACGGAACCGCCATTGTCATTGCCATTAACGGATTCTCTGATCAGAAAATCTTCAATTAGATCGGAATTATGTATTGATGATAAACCAGAGGCAATGCGTCCTGTGGTTTTGGTTCAAGAAAGCACTGGCGTGCGTTTGGTTCAGGCACTTATGGCTTGTGCGGAGGAAATTCAACAAGGAAACATGACCGTCGCCGACACGTTGGTTAATCAGATAGGATTCCTCGCGGCGTCGCAGGGAGGAGCGATGCGGAAGGTAGCATATTACTTCGCACAAGCACTAGCTTGGAGAATCTATGGTTTCTACCCACTCGAAACCCTAGATTGTTCCTCTTACTCCGATGTGCTTCAATGTCACTTCTATGAGTCCTGTCCTTACCTCAAATTCGCGCACTTCACCGCGAACCAGGCAATTCTTGACGCATTCTCGGCGGCAACCACAGTCCACGTCATCGACTTTGGCATCAATCAAGGACTTCAATGGCCGGCGTTAATGCAAGCTCTCGCTCTGCGACCTGGCGGTCCACCGGCATTCCGGCTCACCGGAATCGGAGTAACACAGCCGGATAATGCTGACTCGATTCATGAAGTTGGATTGAAATTAGCGCAATTGGCACAAAACGTTGGCGTTCCATTTGAGTTTCGTGGATTCGTTTGTAACAGCTTGGCGGATCTTAACCCGTTTGTGCTTGAAATCCGACCCGGCGAATCAGTTGCTGTGAACTCTGTTTTCGAGCTTCACCGGTTACTAGCTAGGCCTGGAAACCTAGAAAAAGTGTTGAACATTATCAAGGAGATTAACCCGGAGATAATGACAGTGGTGGAACAAGAAGCGAACCACAACGGTCCGGTTTTCCTAGACCGGTTCACGGAGGCACTGCATTACTACTCGAGCCTTTTTGACTCGCTAGAGGGATCGTTTCCGGGTTCGAGTGAGAGCGCGTTGATGTCAGAGATGTACCTCGGGAGGCAGATATGCAACGTGCTAGCGCGTGAGGGAGAGGAGCGAGTGGAGAGACACGAGACGCTGAGTCAGTGGAGGGTTAGGATGGGTTCAGCCGGGTTCGAACCGATTCGTTTGGGTTCGAATGCGTTCAGGCAAGCCAGAATGTTGCTGGCGTTGTTCACTGCTGGAAATGGGTATAGGGTGGTGGAGGACAACGGGTGCCTGATGCTAGGGTGGCATACGCGCCCACTTATTGCCACCACCGCCTGGAGAGTCGCCACCGCCACTGACTCGGTGGTCTGA 1614 0.4932 MWELGEGRKDMCGNGMDELLEVLGYKVRSSDMEDVAHKLEQLEDVIVTNQQNGISHHHTVHYNPTDLHGWVHNMLNQIDNSNNNDVVPSQGVYNDDSDLRIITGVASFPPPNGEGGNANTPNTEPPLSLPLTDSLIRKSSIRSELCIDDKPEAMRPVVLVQESTGVRLVQALMACAEEIQQGNMTVADTLVNQIGFLAASQGGAMRKVAYYFAQALAWRIYGFYPLETLDCSSYSDVLQCHFYESCPYLKFAHFTANQAILDAFSAATTVHVIDFGINQGLQWPALMQALALRPGGPPAFRLTGIGVTQPDNADSIHEVGLKLAQLAQNVGVPFEFRGFVCNSLADLNPFVLEIRPGESVAVNSVFELHRLLARPGNLEKVLNIIKEINPEIMTVVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGSFPGSSESALMSEMYLGRQICNVLAREGEERVERHETLSQWRVRMGSAGFEPIRLGSNAFRQARMLLALFTAGNGYRVVEDNGCLMLGWHTRPLIATTAWRVATATDSVV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal6g0296 537 Gene3D - 15 78 IPR038088 -
Lal6g0296 537 MobiDBLite consensus disorder prediction 109 129 - -
Lal6g0296 537 Pfam GRAS domain family 168 528 IPR005202 -
Lal6g0296 537 PANTHER DELLA PROTEIN RGL1 16 528 IPR030006 GO:0003712|GO:0005634
Lal6g0296 537 ProSiteProfiles GRAS family profile. 159 528 IPR005202 -
Lal6g0296 537 SMART DELLA_2 17 88 - -
Lal6g0296 537 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 528 IPR005202 -
Lal6g0296 537 MobiDBLite consensus disorder prediction 113 129 - -
Lal6g0296 537 Pfam Transcriptional regulator DELLA protein N terminal 17 82 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal6g0296 Lal-Chr6 1905316 1906929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal6g0296 9 532 GRAS Transcription Factor Family AT2G01570 57.790 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal6g0296 GRAS 8.9e-134 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal6g0296 K14494 - gmx:100799695 673.315